| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1414 |
|---|
| Symbol | ppk |
|---|
| ID | 4184256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1640889 |
|---|
| End bp | 1643018 |
|---|
| Gene Length | 2130 bp |
|---|
| Protein Length | 709 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638071407 |
|---|
| Product | polyphosphate kinase |
|---|
| Protein accession | YP_678025 |
|---|
| Protein GI | 110637818 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0855] Polyphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.350457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.011131 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATTA AAGATTCTAT AAATGCCAAA GGGACACAAG TCTCTACTAA TTATATAAGT
CGCGATTTAA GTTGGATAAA ATTTAATTAC CGGGTTTTAG ATCAAAGTAA AAATGAACAA
CGGAATATTT TTGATCGCCT GAAATTTCTG GCGATTACGT CATCAAACTT AGATGAGTTT
TTTCAGATCC GTGTCGGAAG TTTGTATAAC TATTTAGATT ACGATAGAGA ACGCATTGAC
TATTCAGGTT TGCGTGAAAT AGCATTTAAA AAAGTATTGT TTCAGGAATT ACAGGATTTC
TGTAAAGATC AGCTTGCTGT TTTTACAGAT CAATTGAAAC CTGAATTCGA AAAGAATGAT
TTTACAATTG TTTCAAAAGA AGATGAATTG TCAAAAGAAG AAAATGAAAC GGTAAAAACG
TATTTCAAAA AGACAATTTT CCCCATGCTT ACCCCGATGA CGTATGATAA CCATCATTCG
TTTCCGATCA TGATGAATAA ATTGCTGGTG TTTGGTGTCG TAACCATCAA CCGCAACATT
ATTGGTGAGC AAAGACGATT AACGCTGATC CAGCTTCCGA CCAACATTCC GCGGTTTTTT
GAAATTGAAC GCGACGATAA GATTCTGTTC ATACCGATTC AGGAAATTGT TCGCTGGAAC
ATTTTTAAAT TGTTCAGAAA CGTAGAGATC TTATCCGTAA ATCTTTTCCG TATTACACGA
AACGGAGATT TTTCTGTTGA AGAAAGTGAT GATATTGATG AAGCATTTAT TGATGAAATA
AAAAAGAAAA TCAAGACACG GAAAACAGCA CGTGTTGTCC GTATAGAAGT AGAAGAGCAT
TATTCATCCT GGATGATGAA GATTTTACTT GGCCGTTATC ACATTGATGA AAGCAATATT
TTTATAACGC CAACACTAAT GGATTTTACC TGTCTGTGGC AAATTGTAAA TCATCCGGAA
TTTAAAAACT ATCAGAATAA ATTGTCTCCG CCTGTACAGC CTTTAGCACT TGCGGTTCCC
ACAGGCGATG AATCATTTAA TCTGTTAAAA TATCTGCAGA AGAACGATGT TTTATTGCAT
CACCCGTTCA ATGATTTTAA ATACGTATTG GAATTGCTGG AGCAAGCTGC AGAAGATTCC
GGTGTATTGG CGATTAAAAT TACCATTTAC CGTTTAGCGA AACATTCGCG TATTACGAAT
GCCTTGTTAA AAGCGGCAGA AAACGGCAAG CACGTTTCTG TATTGTTTGA AGTAACGGCA
CGTTTTGATG AAGAGAATAA TATTAAAGAA GCACAGCGTT TACAAAAGGC TGGCTGTTTT
GTAATTTATG GTTTCAATAA ATACAAAACA CATACAAAAC TGATGCTGAT TGTTCGTAAA
AATTCCAACG AATCAATTAC ACGTTATGTA CATATGTCGA GCGGTAATTA CAACGAAGAT
ACGGCACGTT TATATACCGA TATCAGTTTG TTAAGTACAA ACGAAGTGTA TGCCCAGGAT
ATCAGTGAAT TCTTCAATGT AATTACAGGC CACTCAGAGC CGGGTGATTA TCAAAATATT
ATTACGGCGC CGGGAGATAT GCGCCGTAAA TTAATTGAAC TGATTGATCA CGAAGCAGAA
AATGCACGCA ATGGTAAATC AAGCGGGATC GTAATTAAAA TCAACTCCCT GCAGGATAAA
GATGCCATTG ATGCGTTGTA TGTAGCGTCA CAGGCGGGTG TGCCGATCAA ATTGATCGTT
CGTGGTATGT GCTGTCTGCG CCCTGGTAAA GAAGGCTTAA GTGAAAATAT CTCCGTACGT
TCAATTGTTG GAGATTTGCT TGAACATAAT CGTCTGTATT ATTTCCATAA CGAAGGCGAT
CCGAAAGTAT ACGGCGGCAG CGCGGATATG ATGGTACGAA GCTTTGACAG ACGTATTGAA
TCGCTGTTTT TAATAGAAGA TAAATTGTCT AAACAGATTG CACTGGAAAT ATTGAATCTG
AATTTACTGG ACAATGTAAA CTCATATACC TTAACATCAG ATGATGTATA TGTAAAGAAT
ATTCCTACAC AAGGTGAACC GATTGTGAAC GTACACAAAG ATTTTTATTA TCTGGATAAA
AAGAAAGTAC TTAAAGTGAA ATTGTTCTAA
|
|---|
| Protein sequence | MVIKDSINAK GTQVSTNYIS RDLSWIKFNY RVLDQSKNEQ RNIFDRLKFL AITSSNLDEF
FQIRVGSLYN YLDYDRERID YSGLREIAFK KVLFQELQDF CKDQLAVFTD QLKPEFEKND
FTIVSKEDEL SKEENETVKT YFKKTIFPML TPMTYDNHHS FPIMMNKLLV FGVVTINRNI
IGEQRRLTLI QLPTNIPRFF EIERDDKILF IPIQEIVRWN IFKLFRNVEI LSVNLFRITR
NGDFSVEESD DIDEAFIDEI KKKIKTRKTA RVVRIEVEEH YSSWMMKILL GRYHIDESNI
FITPTLMDFT CLWQIVNHPE FKNYQNKLSP PVQPLALAVP TGDESFNLLK YLQKNDVLLH
HPFNDFKYVL ELLEQAAEDS GVLAIKITIY RLAKHSRITN ALLKAAENGK HVSVLFEVTA
RFDEENNIKE AQRLQKAGCF VIYGFNKYKT HTKLMLIVRK NSNESITRYV HMSSGNYNED
TARLYTDISL LSTNEVYAQD ISEFFNVITG HSEPGDYQNI ITAPGDMRRK LIELIDHEAE
NARNGKSSGI VIKINSLQDK DAIDALYVAS QAGVPIKLIV RGMCCLRPGK EGLSENISVR
SIVGDLLEHN RLYYFHNEGD PKVYGGSADM MVRSFDRRIE SLFLIEDKLS KQIALEILNL
NLLDNVNSYT LTSDDVYVKN IPTQGEPIVN VHKDFYYLDK KKVLKVKLF
|
|---|
| |