Gene CHU_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1365 
SymbolmntR 
ID4183493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1587404 
End bp1588111 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content38% 
IMG OID638071359 
Producttranscriptional regulator 
Protein accessionYP_677977 
Protein GI110637770 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATCCT ATACCGAAGA GAATTACCTC AAAGCTTTAT TGAAAATCAC CCTCCAGGAA 
GAAAATGAAG GAGCCGGAAC AAACGAGCTT GCAGCATTGC TATCGGTAAA ACCGGCAACG
GTAACAGATA TGCTTAAAAA GCTTAAGGAT AAAAACCTGG TTTCATACGA AAAATATGGA
AAGATCTTTT TGACGTCTAA AGGGAAAAAA TATGGCACGG ATATCTTACG TAAACACAGG
CTTTGGGAAA CATTTTTATT TCAAAAGCTG GAATTCACCT GGGATGAGAT ACATGAAGTT
GCGGAACAGC TGGAACATAT TCAATCCGCC AAACTCATTG AAAAATTAGA TAAGTTTCTG
GGGCACCCAA CATTAGACCC GCATGGTGAT GTTATACCTA CTTCCAGTGG TGAAATTAAA
ATTCAGTTTA CAAATACCCT GTCGGAAATA GATGTTGACA CAACCTGCCG CATGGTCGCA
GTAAAAGATA ATTCCTCTTC TTTTTTACAG TATGTAGTAA AAATAGGTCT GGCGCTGAAT
ACAGAAATTA AGGTCTTAGC CAAGCAGGAA TACGACTCGT TAATGGAAAT TGAAATCAAA
GGCAAAAGAT GCAGTGTAAG TCAAAAGTTT GCCGAAAATA TTTTTGTTGT CTGCAGCAAT
TGCGTGGTAG GCGAAACCTG CACAAAGAAA AAATGCAGGT TTAAATAA
 
Protein sequence
MLSYTEENYL KALLKITLQE ENEGAGTNEL AALLSVKPAT VTDMLKKLKD KNLVSYEKYG 
KIFLTSKGKK YGTDILRKHR LWETFLFQKL EFTWDEIHEV AEQLEHIQSA KLIEKLDKFL
GHPTLDPHGD VIPTSSGEIK IQFTNTLSEI DVDTTCRMVA VKDNSSSFLQ YVVKIGLALN
TEIKVLAKQE YDSLMEIEIK GKRCSVSQKF AENIFVVCSN CVVGETCTKK KCRFK