Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1365 |
Symbol | mntR |
ID | 4183493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1587404 |
End bp | 1588111 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638071359 |
Product | transcriptional regulator |
Protein accession | YP_677977 |
Protein GI | 110637770 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTATCCT ATACCGAAGA GAATTACCTC AAAGCTTTAT TGAAAATCAC CCTCCAGGAA GAAAATGAAG GAGCCGGAAC AAACGAGCTT GCAGCATTGC TATCGGTAAA ACCGGCAACG GTAACAGATA TGCTTAAAAA GCTTAAGGAT AAAAACCTGG TTTCATACGA AAAATATGGA AAGATCTTTT TGACGTCTAA AGGGAAAAAA TATGGCACGG ATATCTTACG TAAACACAGG CTTTGGGAAA CATTTTTATT TCAAAAGCTG GAATTCACCT GGGATGAGAT ACATGAAGTT GCGGAACAGC TGGAACATAT TCAATCCGCC AAACTCATTG AAAAATTAGA TAAGTTTCTG GGGCACCCAA CATTAGACCC GCATGGTGAT GTTATACCTA CTTCCAGTGG TGAAATTAAA ATTCAGTTTA CAAATACCCT GTCGGAAATA GATGTTGACA CAACCTGCCG CATGGTCGCA GTAAAAGATA ATTCCTCTTC TTTTTTACAG TATGTAGTAA AAATAGGTCT GGCGCTGAAT ACAGAAATTA AGGTCTTAGC CAAGCAGGAA TACGACTCGT TAATGGAAAT TGAAATCAAA GGCAAAAGAT GCAGTGTAAG TCAAAAGTTT GCCGAAAATA TTTTTGTTGT CTGCAGCAAT TGCGTGGTAG GCGAAACCTG CACAAAGAAA AAATGCAGGT TTAAATAA
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Protein sequence | MLSYTEENYL KALLKITLQE ENEGAGTNEL AALLSVKPAT VTDMLKKLKD KNLVSYEKYG KIFLTSKGKK YGTDILRKHR LWETFLFQKL EFTWDEIHEV AEQLEHIQSA KLIEKLDKFL GHPTLDPHGD VIPTSSGEIK IQFTNTLSEI DVDTTCRMVA VKDNSSSFLQ YVVKIGLALN TEIKVLAKQE YDSLMEIEIK GKRCSVSQKF AENIFVVCSN CVVGETCTKK KCRFK
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