| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1338 |
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| Symbol | |
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| ID | 4185843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1561612 |
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| End bp | 1563477 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638071332 |
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| Product | U32 family protease |
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| Protein accession | YP_677950 |
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| Protein GI | 110637743 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.138533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.134167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA AAGTTGAAAT ACTTGCTCCT GCCAAAAACC TATATCAAGG AATGGCAGCT
ATCAATGCCG GAGCAGATGC TGTATATATT GGCGCACCTC AATTCGGAGC ACGAACCAAT
GCAACCAATC CGGTTGAAGA CATAGCAGAG CTTGTGCGTT ACGCACACTT ATTCAAAGCT
CAGGTATTTG TAGTATTAAA CACTATTTTA TACGACAACG AACTAGACAC CTGTGAAAAA
CTCATTCACG AGCTGTATCA TATTGGTGTA GATGCATTGA TCATTCAGGA CATGGCCATT
ATGGAAATGA ACATCCCTCC TATTGTGATC CATGCCAGTA CACAAGCCAA TAACCGCGAT
CCGAAACATG TAAAGTTTCT GGCAGATGCC GGCATGAAAC GCGCCGTGCT GGCACGCGAA
TTAAATTTAG ATCAGATCAG AGACATTGCT GAAGCAACGG ATGTTGAACT GGAATTTTTT
GTTTCCGGAG CCTTATGTGT ATCCTTCAGC GGCAATTGCT ACATGAGTAT TGCCGGCGGA
GAGCGCAGTG CTAACCGCGG CTCGTGTGCA CAAAACTGCC GCTTGCCTTA TAACCTGATT
GATGGTACAG GTAAAACACT TATTGCAAAC AGCCATTTAT TATCTATCAA AGATCTTGAC
TTAAGCGATC AATTACCAAA TCTCATTGAA GCTGGTATTA CTTCGTTTAA AATTGAAGGC
CGTTTGAAGG ATATTGTCTA TGTAAAAAAC AATGTATCCT ACCTGCGCAA AAAGCTGGAT
GCGTTCCTTG AAAATAACGA ACGTTTTGAA AAAGCTTCCT CCGGGCGCAC ATTCTACAAT
TTTGATGCTG AAATGGATCG CAGCTTCAAC AGAGGTTATA CCGACTATTT TGTAAACAAA
AGAACAGAGC GGATCGGCTC ATGGGACACA CCAAAATCTC AGGGACAAGT AATCGGTAAA
GTTATTGAAG TAAAACATAA CGGTTACGTC ATTGAAAATT CAGATAAACT AAACAATGGG
GATGGTTTAT ATTTCATAAA TGAAGCCGGT GAAGCCGATG GCGCGCAAAT AAATACAATC
ACCAATAATG TAGTTATTCC AAATACCTTT AAGCCAATTA AAGTCGGCAC AATGATTTAC
CGGAATGCCG ATGCGGAATT CAATAAATTG GTTGAACGGG AAGACAGTGC GATCCGTAAG
ATCGGCGTAT CGCTGCTATT CAGTGAAGTA CCTGAAGGTT TCCAGCTTAA AGCAATTGAT
GAAGACGGAC ATGAAAGTAT TTCAACACTT GACGTTCAGA AGGAATTAAG CAAAAATGGC
GACGGCGTTA TAGACAACAT TAAAAAAAAT CTGGCTAAAA CAGGAAATAC ACCGTTTATC
GTTGACAAGC TGGACGTAAC GCTTTCAGCA AATTGGTTTC TGCCTATTTC AAAAATAAAT
GAGATCAGAA GAATTGTATT AGAAGAACTG ATTGATGTAC GTGTTGCTTC ATACAATCGT
AAAGAATATC AAATCAAAAA AACGGATCAT CCATATCCGG TAGAAAAACT CGATTTCATG
TATAATGTAT CCAATAAAAT GGCCAGGACA TTTTACCACA GACATGGTGT TACTGAAATT
GAAAAAGCAT TTGAATTACA ATGGGACCCG GGCAAGGCAC GTGTAATGAC AACCAAATAC
TGCGTAAAAT ATGAATTAGG CAAATGTGCA CGCTATCAGC GCGACACCAT GGGCGAAAAA
GTTGTCGAGC CTTTAGTATT AAAGCATGGT GAAAATGAAT ACAAACTTAA ATTCAATTGT
AAACCTTGTG AAATGGAGAT CTGGGAAAAG GATGCCGATC TCGTTTTTGA TGAAGATGAT
TATTAA
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| Protein sequence | MKKKVEILAP AKNLYQGMAA INAGADAVYI GAPQFGARTN ATNPVEDIAE LVRYAHLFKA
QVFVVLNTIL YDNELDTCEK LIHELYHIGV DALIIQDMAI MEMNIPPIVI HASTQANNRD
PKHVKFLADA GMKRAVLARE LNLDQIRDIA EATDVELEFF VSGALCVSFS GNCYMSIAGG
ERSANRGSCA QNCRLPYNLI DGTGKTLIAN SHLLSIKDLD LSDQLPNLIE AGITSFKIEG
RLKDIVYVKN NVSYLRKKLD AFLENNERFE KASSGRTFYN FDAEMDRSFN RGYTDYFVNK
RTERIGSWDT PKSQGQVIGK VIEVKHNGYV IENSDKLNNG DGLYFINEAG EADGAQINTI
TNNVVIPNTF KPIKVGTMIY RNADAEFNKL VEREDSAIRK IGVSLLFSEV PEGFQLKAID
EDGHESISTL DVQKELSKNG DGVIDNIKKN LAKTGNTPFI VDKLDVTLSA NWFLPISKIN
EIRRIVLEEL IDVRVASYNR KEYQIKKTDH PYPVEKLDFM YNVSNKMART FYHRHGVTEI
EKAFELQWDP GKARVMTTKY CVKYELGKCA RYQRDTMGEK VVEPLVLKHG ENEYKLKFNC
KPCEMEIWEK DADLVFDEDD Y
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