| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1318 |
|---|
| Symbol | |
|---|
| ID | 4186128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 1530952 |
|---|
| End bp | 1531965 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638071312 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_677930 |
|---|
| Protein GI | 110637723 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.889926 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0248237 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTAC CTTATATTGT TTTTATTTTA CTTATTTTCT GTTTTCAGAG CTGTTTACCC
AGCCGTACCT TTTCACACGC GAAACATCCG GCGGTACCGG ATTATTCGGA TGAATACAAC
TGGGTAGCAC TTCCCTGGAG ATTTGATGCC GCCGACTGCA TTCCGCAGGG CTGTCCTACA
CCTGACCGGC AAGACAGTGC AGCGGTTGAT GTTTTTTATG TATACCCGAC AGCGTATATC
ATCGGCACAA AGTGGAACGC CAAAATATCT AATCCGCGTA TCATCGGGCG GGTTGGTACG
ATTACCGAAT CTCAGGCGAG CGTGTATAAT AACATTGGCA AAGTATATGC GCCTTTATAC
AGGCAAGCTA TTCTCAAATC TTTTTTTAAT AAAAAGAGCG GCCCGCTGGC ATTAGACCTT
GCTTACTCAG ATGTTAAAAG AGCATTTGAT TATTACATGG CACATTGGAA TAACGGCAGA
CCCTTTATTT TGGCAGGTCA CAGCCAGGGC TCCAATCACC TGATCCGTTT ATTAAAAGAA
GAAATAGATG GTAAAGAGAT TCAGAAACAA TTAGTAGCGG CTTATTTAAT TGGTATGCCC
GTGTCTGACA CAACATTCAA AAGCATTAAA CAGGCCCAGA CAGAAACACA AGTTAATGGG
TATGTTTCCT GGAACACGTT TAAATATGGT ACCCGATTAA AACCGTCTGA CTATTTTTCC
GGAGGAACAT GTACGAACCC GCTGAGCTGG AAATCAGATA CAACGTTGGT GCCGGCCTCC
TTAAACCCGG GCGGCGCACC GTTGAAACTA AACCGCATCG ACCAGGCTCT GTGCGGTGCA
AAAATAAACA ATGGAATATT ATGGGTACAA AAGCCAATCA AAAAGGGATA TATCCGGTTG
GGTAAAAGCT ACCACTTATG TGATTATAGT TTATTTTATC TTTCGATCCG GAATAATGCC
AAGGCACGGA CAGATTCTTA TTTCAAAAAA TATTCTGCAC ACACAAGCAA CTAA
|
|---|
| Protein sequence | MHLPYIVFIL LIFCFQSCLP SRTFSHAKHP AVPDYSDEYN WVALPWRFDA ADCIPQGCPT
PDRQDSAAVD VFYVYPTAYI IGTKWNAKIS NPRIIGRVGT ITESQASVYN NIGKVYAPLY
RQAILKSFFN KKSGPLALDL AYSDVKRAFD YYMAHWNNGR PFILAGHSQG SNHLIRLLKE
EIDGKEIQKQ LVAAYLIGMP VSDTTFKSIK QAQTETQVNG YVSWNTFKYG TRLKPSDYFS
GGTCTNPLSW KSDTTLVPAS LNPGGAPLKL NRIDQALCGA KINNGILWVQ KPIKKGYIRL
GKSYHLCDYS LFYLSIRNNA KARTDSYFKK YSAHTSN
|
|---|
| |