Gene CHU_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1254 
Symbol 
ID4186946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1464238 
End bp1464828 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content38% 
IMG OID638071248 
Producturease accessory protein 
Protein accessionYP_677866 
Protein GI110637659 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.735612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACAC CGATACTTAT AGGTTTGTCC CACTCTGTTG AATCTGATCA TGTAATTGCG 
GTAAGTAATC TGATCGATGT ACGCCATGGC TTGCTGAAAG AAGCATTGCG AGGCGCATCA
TGGGGCCTTG GTCATACCGT ATCTGTAATG GTTTCAGCAT TTATCTTATT GTTTATTAAA
AACTCTGTAG AATTTTCTCC TGAATTTTCG CTGGAGTTAC TGGTGGGAAT TATGATGGTT
GTTATTGGTG TGATACGCTT ATTTGCCATC GCTGCTAAAA AACATATGCA TCCTCACCGG
GAAAATAAAT ATGTGTTTTT TAATGTAGGG ATTATTCATG GCCTTGCAGG AAGCGGTACC
ATAGCTGTAC TATTAACAAG CCAGTTTACT ACCTTATACG AACAGACACA ATTCCTTTTC
TTATTTGGAT TAGGCACAAT CATCGGTATG GGAATTATTG CCGCGTTTTT TACACGGTTG
AAATTTTTAA AACCTAAGTA TTTGCTCGCA TTCTCTTATA TCATTGCTTC TGTGTCGGTG
CTTTACGGCA TAAAAATTAT TTACGAACAA CTCTATACCT ATATCAACTA A
 
Protein sequence
MLTPILIGLS HSVESDHVIA VSNLIDVRHG LLKEALRGAS WGLGHTVSVM VSAFILLFIK 
NSVEFSPEFS LELLVGIMMV VIGVIRLFAI AAKKHMHPHR ENKYVFFNVG IIHGLAGSGT
IAVLLTSQFT TLYEQTQFLF LFGLGTIIGM GIIAAFFTRL KFLKPKYLLA FSYIIASVSV
LYGIKIIYEQ LYTYIN