Gene CHU_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1243 
SymbolipyR 
ID4187033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1449843 
End bp1450370 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content38% 
IMG OID638071237 
Productinorganic pyrophosphatase (PPase) 
Protein accessionYP_677855 
Protein GI110637648 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.476966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTATAA CCGCTATGAA AGTAAGACAT GCACAGCCAT ACAAAGGTGA TATTATTCAT 
GTTGTAGTAG AAACACCTCA ATATTCTTTA GAAAAATATG CATACGATCG GGATTTAAAA
GCATTCAGCC TTAAAAAAAC CTTACCGGCG GGCAGTGCTT TTCCATTTGA TTTCGGATTT
GTGCCAAATA CCTTATGCGA TGACGGAGAT CCGGTTGATG CGTTGGTCTT AGTAGAAGGG
GAGACATATC CGGGATGTAT CCTGGCTGCA CGTTTAGTGG GTGTGCTTGA AGCGGTTGAA
GCAGATAAAA ATAATAAGCA GGTACGCAAC GACCGGTTAA TAGCTGTTTC TGTTGAATCG
CAGCTATATA AAAATATAAC GGATGTTAAA GAGCTGGATA AAAAAATGAT TCATTCTATA
GAAGATTTTT TTACCAGTTA TAACAAACAG GAAGGCAGAA CATTTAAGCC ATTGAAATGG
AACAATGCAA AAGCAGCCCA TAAAAAAGTG CTCACCTGCA AAGAGTAA
 
Protein sequence
MIITAMKVRH AQPYKGDIIH VVVETPQYSL EKYAYDRDLK AFSLKKTLPA GSAFPFDFGF 
VPNTLCDDGD PVDALVLVEG ETYPGCILAA RLVGVLEAVE ADKNNKQVRN DRLIAVSVES
QLYKNITDVK ELDKKMIHSI EDFFTSYNKQ EGRTFKPLKW NNAKAAHKKV LTCKE