| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1230 |
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| Symbol | pqqL |
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| ID | 4187021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1420406 |
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| End bp | 1423345 |
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| Gene Length | 2940 bp |
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| Protein Length | 979 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638071225 |
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| Product | zinc protease |
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| Protein accession | YP_677843 |
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| Protein GI | 110637636 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.837321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATT TTATTCTCAG TATCGGATTA AGCATCGGTT GCTTTTCAGC GGCTCTTTCT
CAAACAGCTT TTGAAACAAA AACAGCGACC GACTCCAAAG GGCGCAACTA TGAATACGTA
ACCAATGATC CGCTTAAGGC CCGTATCTAC ACCCTTTCAA ACGGATTGAA AGTATATCTG
TCCGATTACA AAGATGCTCC CCGCATCCAG ACATACGTAG CCGTACGCAC CGGCAGCAAG
AACGATCCCG CAACGGCAAC CGGGCTCGCG CATTACCTGG AACACATCTT GTTTAAAGGT
ACATCAAAGA TCGGTACATC AGACTGGCCG AAAGAACAAA TTGAACTGGA TAAAATAGAG
GCATTGTATG AAGTGTACCG AAATACGGCA GATGCTAAAA AACGTACGGC CATCTACCAT
CAGATCGACA GCATCTCTGT TGTAGCAGCA GGGTATGCGA TCGCAAATGA ATACGACAAG
ATGCTGAGCC AGATCGGCGC GCAGGGCACC AATGCCTATA CCTTTGTAGA ACAGACCGTA
TATGTAAACG ACATTCCATC CAACCAGATC CAGAAATGGG CAGAGATCGA AGCAGAACGG
TTCAGCATGG TTGTTCCGCG CTTGTTCCAC ACAGAGCTGG AAGCAGTTTA CGAAGAAAAG
AACAAAGGCC TGGATAATGA TGGCAGAAAA GTCTTTGAAA CTACCATGGC TTCGCTGTTT
AAAAAAGATG CATACGGCAC ACAGACAACC ATCGGTACGG TAGAACATTT AAAAAACCCG
TCAATCACAG AAATTAAAAA ATACTTCAAT ACGTATTATG TAGCCAATAA CATGGCGATC
TGCATGAGCG GCGACCTGAA TTACGATTCC ACGATTACCC TGCTGGAAAA ACAGTTTTCA
AAATTACTCA AAAAAGATGT ACCCGTGTTA GCGGCGCCGG TTGAAGAGGC CATTAAAATA
CCGTTGCAGG CAACTGTTGT CGGGCCAACA GCAGAAAGCG TATCGCTTGC TTACCGCCTG
GATGTTGCCA TACCAAAAGA CCCGGCATTC AGAAGCAAAT TAAAAATGAT CCAGATGCTG
CTAACAAATG GTCAGGCTGG CTTAATCGAT CTGAATATCA ATCAGGCGCA GAAAGCAATG
GGGGCCTACT CCTACGATCT GCCGCTGAAA GATTACAGCA TCTTAATGCT TGGCGGAAAA
CCGCTGGAAG GCCAGACACT GGAAGCCGTA GAAGCATTAC TGTTACAGCA GATCACGAAT
TTAAAGACAG GCAATTTTAA AGACTGGCTC ATCCCGGCTG TTGTAAACGA TTACAAAACA
AGTACCATGA CGCAGTTTGA AAGTAACAAA GCACGTGCCG ATGCGTTTGT AGATGCGTTT
GTATGGGGCA TCAGCTGGAA AGATTACATC AATGAAATCA ATATCCTGCA AAGCATCACC
AAACAGCAGG TACAGGATTT TGCAACCGCA TACTTTCAGA ATAATTATGT AACGGTATTC
AAACGCAAAG GCGTTGACTC TACGATACAG AAGGTACCAA AGCCGATCAT TTCTTCCGTG
CCGGTAAACA GAGACAGCCA GTCTGACTTC TACAAAGAAG TTTTCAAAAC GCCGTCTCCG
GTGATCAAAC CCGTATACCT GGATTATGCA AAAGAACTCA CGGCTTCAAT CATCGGTGTA
TTCCCTGCTT TGTATAAACA GAATAAAGAA AACGCATTAT TTACGCAGCA ATACAAATGG
GATTTAGGCA AAATGCCGGA CCCGCAGAAC AGCTTAATGC TCTCCTACCT GAATTACCTG
GGCACGGATA AATATACGGC AGAGCAGCTG CAGGAAGAGT TCTATAAACT TGGCTGTAAT
TACTCCTTCC GCATAGCAGG CAGTGAATTA ATTCTTACAC TTTCCGGCAT ACAGGATAAT
TATGTAAAAG CATTAACCTT ACTTGAATCG TTTGTTCAGC GCATGAAAGG CAACAATGAA
GCGCTGGCAC AAATCAAATC AAACATCTTA AAAAGCCGGG CAGACAACAA AACCAATAAA
GATGTTATTC TGCGTTCGGC AATGGCAGGC TATGTTAAGT ACGATGGTAT CAATCCATTT
ACCAATATCA TTCCGGAAGA TCGCTTAAAA GTAATTACAT CCGAAGAATT GATCGCGGCA
TTTAAACAAC TGTACAATTC AAAACATGAA ATTGTTTATT ATGGCCCGGC ATCTTTTGCT
GCACTATCTA AATCCATTAC AAAGCTGCAT AAATCAAAAG GTGAATCGCT GATGCGCATT
CAGACAGCTT ATTCGTTCAG TAAACCGGCA GCAAACAAAG TGTACTGGGT AAACTACGAT
ATGGTGCAGG CTGAAGTATT ATTACTTTCC CGCTCCGTTG ATTTTAATAA AGAACTGATT
CCGGCCATTC AGCTATACAA CGAATATTTT GGCGGCAGCA TGGGCAGTCT GGTATTTCAG
GAAATGCGTG AATCAAGAGC GCTGGCTTAT TCCGTTAAAT CTACGTTTGA CCTGCCGTAT
TATCCTTCCG ATCCCTTCTA TTCTACGTCA TACATCGGTA CGCAGGCAGA CAAGATTCAG
GAAGCGTTGA GTGGCATGGT TGAACTGATT GATAACATGC CGAAATCTGA TCTCCTGTTT
GAGAACTCTA AAATCTCTAT TTTAGAAACC ATTGCAACGC AGCGTGTAAC CAAACTGGGT
GTATTGAATG ATTATGAGCG CAACAAACGC ATGGGTTATA CAACAGATAT CCGCAAAGCA
ATTTTCGATT CCATATCTGT CATGACGTTC AATGATATCC ATACGTTCCA GCAGACATAC
ATAAACAAGC AGCCGCGCAT CATTCTGATC ATCGGTTCAA AAGATAAAAT TGATTTTAAC
AGCTTATCTG AATACGGAGA AGTAAAAGAG CTGACACTGG AAGAGATCTT TGGATATTAG
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| Protein sequence | MKHFILSIGL SIGCFSAALS QTAFETKTAT DSKGRNYEYV TNDPLKARIY TLSNGLKVYL
SDYKDAPRIQ TYVAVRTGSK NDPATATGLA HYLEHILFKG TSKIGTSDWP KEQIELDKIE
ALYEVYRNTA DAKKRTAIYH QIDSISVVAA GYAIANEYDK MLSQIGAQGT NAYTFVEQTV
YVNDIPSNQI QKWAEIEAER FSMVVPRLFH TELEAVYEEK NKGLDNDGRK VFETTMASLF
KKDAYGTQTT IGTVEHLKNP SITEIKKYFN TYYVANNMAI CMSGDLNYDS TITLLEKQFS
KLLKKDVPVL AAPVEEAIKI PLQATVVGPT AESVSLAYRL DVAIPKDPAF RSKLKMIQML
LTNGQAGLID LNINQAQKAM GAYSYDLPLK DYSILMLGGK PLEGQTLEAV EALLLQQITN
LKTGNFKDWL IPAVVNDYKT STMTQFESNK ARADAFVDAF VWGISWKDYI NEINILQSIT
KQQVQDFATA YFQNNYVTVF KRKGVDSTIQ KVPKPIISSV PVNRDSQSDF YKEVFKTPSP
VIKPVYLDYA KELTASIIGV FPALYKQNKE NALFTQQYKW DLGKMPDPQN SLMLSYLNYL
GTDKYTAEQL QEEFYKLGCN YSFRIAGSEL ILTLSGIQDN YVKALTLLES FVQRMKGNNE
ALAQIKSNIL KSRADNKTNK DVILRSAMAG YVKYDGINPF TNIIPEDRLK VITSEELIAA
FKQLYNSKHE IVYYGPASFA ALSKSITKLH KSKGESLMRI QTAYSFSKPA ANKVYWVNYD
MVQAEVLLLS RSVDFNKELI PAIQLYNEYF GGSMGSLVFQ EMRESRALAY SVKSTFDLPY
YPSDPFYSTS YIGTQADKIQ EALSGMVELI DNMPKSDLLF ENSKISILET IATQRVTKLG
VLNDYERNKR MGYTTDIRKA IFDSISVMTF NDIHTFQQTY INKQPRIILI IGSKDKIDFN
SLSEYGEVKE LTLEEIFGY
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