Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1218 |
Symbol | |
ID | 4184666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1397699 |
End bp | 1398121 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638071213 |
Product | negative regulator of sigma-B |
Protein accession | YP_677831 |
Protein GI | 110637624 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAAAA TACCTATTTT AAGAATGGGT CACTTTCTTT TGGTGACAAT ACAAGTGGAT CTGTACGATC AGCTGGCAGA AAATCTGGAA GCTGATCTGG TTAATATGGT CAGCAAGACA AATGCAAAAG GTGTACTTAT AGATGTTTCC TCCGTTTCTA TCATTGATTC TTTTATGGGC CGGATTCTGG GAAACATTGC TACCATGTCT AAAATCATGG ATGCCGATAC GGTAGTGGTT GGTATGCAGC CCGCGGTAGC AATAACCCTG GTAGAATTGG GATTGCCGTT AAAAGGTGTG TATACAGCTT TGAATGTTGA AAGAGGAATG GAATTGTTGA GGTCAAAAAT CCTTCTTGAA GAAGAAGATC AGGAAGAAGA ATATGACAAC GATGACAACA ATGACACCGA TAGTCCTGAA TAA
|
Protein sequence | MEKIPILRMG HFLLVTIQVD LYDQLAENLE ADLVNMVSKT NAKGVLIDVS SVSIIDSFMG RILGNIATMS KIMDADTVVV GMQPAVAITL VELGLPLKGV YTALNVERGM ELLRSKILLE EEDQEEEYDN DDNNDTDSPE
|
| |