Gene CHU_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1218 
Symbol 
ID4184666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1397699 
End bp1398121 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content40% 
IMG OID638071213 
Productnegative regulator of sigma-B 
Protein accessionYP_677831 
Protein GI110637624 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA TACCTATTTT AAGAATGGGT CACTTTCTTT TGGTGACAAT ACAAGTGGAT 
CTGTACGATC AGCTGGCAGA AAATCTGGAA GCTGATCTGG TTAATATGGT CAGCAAGACA
AATGCAAAAG GTGTACTTAT AGATGTTTCC TCCGTTTCTA TCATTGATTC TTTTATGGGC
CGGATTCTGG GAAACATTGC TACCATGTCT AAAATCATGG ATGCCGATAC GGTAGTGGTT
GGTATGCAGC CCGCGGTAGC AATAACCCTG GTAGAATTGG GATTGCCGTT AAAAGGTGTG
TATACAGCTT TGAATGTTGA AAGAGGAATG GAATTGTTGA GGTCAAAAAT CCTTCTTGAA
GAAGAAGATC AGGAAGAAGA ATATGACAAC GATGACAACA ATGACACCGA TAGTCCTGAA
TAA
 
Protein sequence
MEKIPILRMG HFLLVTIQVD LYDQLAENLE ADLVNMVSKT NAKGVLIDVS SVSIIDSFMG 
RILGNIATMS KIMDADTVVV GMQPAVAITL VELGLPLKGV YTALNVERGM ELLRSKILLE
EEDQEEEYDN DDNNDTDSPE