| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1131 |
|---|
| Symbol | barA |
|---|
| ID | 4185186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1303143 |
|---|
| End bp | 1304264 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638071128 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_677746 |
|---|
| Protein GI | 110637539 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2202] FOG: PAS/PAC domain
[COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTTATA GAGAATTATA TATGCCTATT AAATCCACGT CCAGGTTCGA CTTAGAATCC
AGGTACCAAG CTATTATTGA CAACGCTGTA GACGGTATTA TTACCATTGA CGACCGCGGT
ATCATTGAAT CCGTAAATCC GTCTGCCATA AAAATGTTTG GGTATGCTTC AACGGAACTC
ATCGGGCAAA ATATTAAAAT ACTGATGCCT GAACCGGATC GCGGTAATCA CGATAAATAC
ATCGGTACGT ATCATGAAAC AGGTAAAGGC AAGATTATCG GGAAAGGCCG GGAAGTGATC
GGGAAACGTA AAAATGGAAC AATGTTCCCG TTTTTGCTTA GTATCAGTGA AGTTATTCTG
GAGAATAAAA AGATTTTCAC CGGTATCATT CACGATATCT CCGAACTTCG GGAAGTAAAG
GAAGCATTGG CCAAAGAACG TGATCTGAGT GAATTGAAAT CGCGTTTTGT AACCATGGCT
TCGCATGAGT TCCGTACACC GTTAAGCACG ATCTTATCTT CTGTATCGCT TATATCCAGA
TATAATGATC CGAAAGATGA AGACAAGCGA CTCAAGCATG TGAACCGGAT CAAGTCATCC
GTGAACAATT TAACGAGTAT TCTGAATGAC TTTTTATCGC TGAGCAGGCT TGAAGAAGGC
ATGGTGCTGA ATGATCCGAT TGAATTTTCA ATTCAGGAAC TGCTGTATGA AGTGGTGGAT
GAAATGAATA GTATTCTGAA AGAAGGTCAG GTGATCAGTA TAAGCAAAGA GAACGAAATT
CAAAAAGTAT TTCTGGATAA AAATTTAGTA CGCAACATTA TGATCAACCT GGTTTCAAAT
GCGATTAAAT ATTCCGGAGA AGGTCAGGAA ATACGTATAC AAACAGCGGC AACAGAACAG
GTATTAAGCA TTACAATTAT AGATGAAGGT ATTGGTATTC CGGAAGAAGA CCAGTCGTAT
TTATTCAGCC GGTTCTTCCG GGCGCACAAC GCCACAAATA TTCCGGGTAC AGGTTTAGGA
TTAAACATCG TAAAAAAATA TCTGGATTTA CTGCGCGGGC GCATAGAGTT TACAAGCAAA
CAGTCACAGG GTACAACATT TATTGTTCAG ATTCCTTTTT AA
|
|---|
| Protein sequence | MTYRELYMPI KSTSRFDLES RYQAIIDNAV DGIITIDDRG IIESVNPSAI KMFGYASTEL
IGQNIKILMP EPDRGNHDKY IGTYHETGKG KIIGKGREVI GKRKNGTMFP FLLSISEVIL
ENKKIFTGII HDISELREVK EALAKERDLS ELKSRFVTMA SHEFRTPLST ILSSVSLISR
YNDPKDEDKR LKHVNRIKSS VNNLTSILND FLSLSRLEEG MVLNDPIEFS IQELLYEVVD
EMNSILKEGQ VISISKENEI QKVFLDKNLV RNIMINLVSN AIKYSGEGQE IRIQTAATEQ
VLSITIIDEG IGIPEEDQSY LFSRFFRAHN ATNIPGTGLG LNIVKKYLDL LRGRIEFTSK
QSQGTTFIVQ IPF
|
|---|
| |