Gene CHU_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1120 
Symbol 
ID4186495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1293141 
End bp1294208 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content38% 
IMG OID638071117 
Productmembrane protein 
Protein accessionYP_677735 
Protein GI110637528 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.193884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATAT TCTTAACTAT TATTGTGACA TTTTTATGTA TGCCCTGGCC GGCTATGATC 
ATGATGTCAC CTATGATGAT TGCTGCTCCG GGTTTTGCAA ATAAAAAATC ATACATAATT
TGTGCAATGT TGTTTTTTAT CTACCCTTCC GGCATCTTTC TGTTACTCAA ACTAACAGGT
TATTCTTTTT ACGGAACCGA TCCGATTTGG TGGGCCGCCG CAGCTTGTAT TGCAGGCATG
CTGGTTTCAT TGCTATATCA GCTGCCTAAA CAATTATACA ATACCTGGAA AGGAATTTCG
AACTATGACT ATTTTATCAC AGATACCTCC GTATACTTCA ACGGCAGCAA ACTAAAAAAT
GCTGACGCGA AGACATTCAC GCATTTCAAT AACAGAGGAT ATTACAGCAA AGATAAAAAT
CAGGTATATT ATAATTCAAA AAAAATAGAT ACCGCGGATG CTGCTACATT TCAACCGCTT
TTACATGATG ATACCAAAAG CTTCTGGCAC GATAAGAACA ATGCGTATTA TCAATGGAAC
CAGCGGATAA AAGGCGCCGA TGGTGCAAGT CTGGAATATG CAGGAGAAAG ATATGTGTAT
GACAGAAAAC ATGTTTTTTT TGAAAACACA TTATTACAGG ATGCAGACAG AACAACATTC
AAAACCATGC CCGGCAATAC AGGCAAGGAT AATAAAAACG TTTTTATACG TTCCATAAAA
GTTACTGCTG TTAAAGATCC GGCAAGTTTT GAAATCATAT CCATACAGGA TGAACTATTT
GGTAAAGACA AGAATCAGAT CTATGCACTG CATTACAGCG CTGAGCAGCC ATTAATACCT
TTTCCGGATG CAGATATCGC CACCTTTGAA GTAATCGGCG AACAGTATGC AAAAGATAAA
AACAAGGTAT ATTATTACAG CTATCACCTG AATGAAATCC GTGTATTAGC AGATGCTGAT
CCGGAAACCT TTACCCTTTA TTTTGATCAA TCCAGACGAA CTGATGCAAC CGATGGAAAA
AAATACTACC GGGCTGGTAT ATTGCATGCG GAACAAAAAT CAAATTAA
 
Protein sequence
MHIFLTIIVT FLCMPWPAMI MMSPMMIAAP GFANKKSYII CAMLFFIYPS GIFLLLKLTG 
YSFYGTDPIW WAAAACIAGM LVSLLYQLPK QLYNTWKGIS NYDYFITDTS VYFNGSKLKN
ADAKTFTHFN NRGYYSKDKN QVYYNSKKID TADAATFQPL LHDDTKSFWH DKNNAYYQWN
QRIKGADGAS LEYAGERYVY DRKHVFFENT LLQDADRTTF KTMPGNTGKD NKNVFIRSIK
VTAVKDPASF EIISIQDELF GKDKNQIYAL HYSAEQPLIP FPDADIATFE VIGEQYAKDK
NKVYYYSYHL NEIRVLADAD PETFTLYFDQ SRRTDATDGK KYYRAGILHA EQKSN