Gene CHU_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1115 
Symbol 
ID4186490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1290052 
End bp1290441 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content39% 
IMG OID638071112 
Producthypothetical protein 
Protein accessionYP_677730 
Protein GI110637523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.263126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAT TAAATAAGGA AGTGTCTGAT TTTTTAGAAG CGCTGAATCA TCCGTTGATA 
AAAGAAATTC AGCTGTTGCG TGAAATTATT TTGCAGGCAG ATAAATCGTT GTCTGAAAAT
ATAAAATGGA ACGGGCCGAA TTATCTATCA AACGGAGCGG ATCGAATTAC GATGAAAATT
CAACCGCCTA AAAACATACA GCTTATTTTT CATCGGGGTG CAAAAGTAAA AGCACAACCC
CAGGACAGGC TTATTAAGGA TGAATCGGGG TTGCTTGCCT GGAAAGAAAA CGATCGTGCC
GTTGCAACAT TTAAAAATCT TACGGATGTT GAAGGTGCGA AAAAAACGCT AACAGATATT
GTTAAAAAGT GGATCGCTGC CACGTCCTGA
 
Protein sequence
MKQLNKEVSD FLEALNHPLI KEIQLLREII LQADKSLSEN IKWNGPNYLS NGADRITMKI 
QPPKNIQLIF HRGAKVKAQP QDRLIKDESG LLAWKENDRA VATFKNLTDV EGAKKTLTDI
VKKWIAATS