| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1113 |
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| Symbol | ptpA |
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| ID | 4186488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1289356 |
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| End bp | 1289679 |
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| Gene Length | 324 bp |
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| Protein Length | 107 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638071110 |
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| Product | protein-tyrosine-phosphatase |
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| Protein accession | YP_677728 |
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| Protein GI | 110637521 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4551] Predicted protein tyrosine phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0412586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAATATTC TTTTCGTATG TAGCCGTAAT AAACGGCGCA GCTTAACAGC TGAAACAATA
TATAAAAACA GTGCATCGTA TACGGTACGG TCTGCAGGTA CCGAACCGTC TGCACGTATA
AAAGTAACAG CCAGGCTTAT TGATTGGGCA GAAGTAGTAT TTGTAATGGA GAAAAAGCAC
AAACAGCGTA TGTTTGAAAA TTTCCAGAAC GAACTTTCAA ATAAGGAAAT TGTAGTACTG
GATATTCCGG ATGATTTCCG GTATATGGAT GAAGAGCTTA TCGAAATTCT GCAAACTTCT
GTTGACAGTT ATTTCCGAAA CTAA
|
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| Protein sequence | MNILFVCSRN KRRSLTAETI YKNSASYTVR SAGTEPSARI KVTARLIDWA EVVFVMEKKH
KQRMFENFQN ELSNKEIVVL DIPDDFRYMD EELIEILQTS VDSYFRN
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