Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1092 |
Symbol | arcB |
ID | 4187140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1269534 |
End bp | 1271288 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638071091 |
Product | aerobic respiration sensor-response protein; histidine protein kinase |
Protein accession | YP_677709 |
Protein GI | 110637502 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.962322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGGTA AGAAACAGGA AGTTCAGGAA GAATTGCTGG AAGAACAATT GGAAAAAGCC TATCAGGGCC GTATCAATAA TATAAAAGAA AGTTTTGCCG GCGTGCTTTC TGTTTTAAAA ACAGCAAATA CAAAAAAGCT TGAACGCATA ACTGCCCGTT CGCACAATTA TCTGGGTTTG CTGCATATGA TTCAGGGGAA TCATATAAAA TCAATTACAC ACTCCCGTCA GGCGCTGGAG TATTTTCAAC GTGTTCAGAG CCTGAAAGAC ATTGCAGATG CTAAATTCAA TATTGCAAGT TCTTTATATA AAACAGATAA TTTTCACGAT GGGCTGAAAG GTTTGCTGGA ATGCAGGCAG ATCTACAAAA GCATTGGTGA AGGCAGAAGT GAATGCCGCA GTTTAAAATC CATTGCAACC ATATATGAAT ATTGGAGCGA CGTCAATAAA GCGTTTCTCA TCTATCAGGA ATGTATTGAT CTTGCTACCA GACACGGCGA TCTTGCCATG CTTTCAAATG TATATAATCC CATGTCTGGT TTATACCTGA AGCGTGGTGA TATTGAAACA GCTACCAAAC TTTCCGATAA AAGCATTGCC ATAAAGAAGA AAATTAAAGA CGAGCGCGGA CTGGCCTATT CGATCTATGG TAAAGGCAAA GTATTTTTTG CTCAGCAGAA ATTTGCACAG GCTGAAACGT ATTTTTTGCA GAGCCTGGAA TTACAGCAGA AGTTCGGTGA TAAACTCGGC GCGGGAATGG TATTAAATAA GCTTGGCTTA ACCTATGTAG AGCAAAAAAA ATATCTGCAG GCAGAAAAGA TATTGAAGCA GGCCGTTTCA CTTGCTGAAA AACATAATGT AAAAGTAAAT GTATATAAAT CGTATTACAG TTTGTATACC TTATACAAAC TGCAGCATAA AGAATCGAAC GCGTTGCAGT GCCTTGAACA GTTTGTTTTA CACAAAGAAA ATAATGTGCA GTCGCATACC TCAGATATCA TCAGAAGTTA TGAAGCTGCG AATGAGATAT ACCGGTTGGA GAAAGACACA AAAGCACAGA TTGATTACCT GGAAATAGTA CAGAAGAAAA ATACCGAGCT GGATTCTTTT TTTTACAGAG TCTCACACGA TCTCAAAGGC CCCATTTCAT CACTTTTGGG ATTAAATGAA TTGATCGAAA AGGAACAGTT TGACGGTGAA GCGCTCAAGT ATTTCAATAT GTATAAAAAG CTCTCCACCC GTATCGATGC GATTGTCATG GACCTGATCA CCATCACACG TATCAGCTCC GACAAGATTG TGCCGGTAAA GATTGATTTT ATGCAGCTTA TTGAAGACTG TATTCATTCG TATGCATACT TCGATAATTT TGAGCACATA CAATTCAATA TTGAAGTTGA AGAAGGTATT TCTTTCCAAT CGGAATGGGT AATCGTAAAT ACCATTCTGC AAAATCTGAT TGAGAACTCG ATCAAATACA TGCGCCACGA TGTAAAGAAG CCTTATGTGT TTATACAGGT GTATACGCAG GGGCAGATGC TTTGCATTAA AGTGACAGAT AACGGACAAG GAATCTCTGA AGAATACCAG GAAAAAATAT ACGAAATGTT TTTTCGTGCA AACGATAAAG CAGACGGTTC CGGTTTAGGT TTGTATATAT TAAAGCGCGC CGTAGAACGT CTGCAGGGAA CGGTTTCGTT GAAGTCCAAA CCTGGCAAGG GAGCTGCCTT TACTGTTTGT ATCAAAGGGG AATAA
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Protein sequence | MPGKKQEVQE ELLEEQLEKA YQGRINNIKE SFAGVLSVLK TANTKKLERI TARSHNYLGL LHMIQGNHIK SITHSRQALE YFQRVQSLKD IADAKFNIAS SLYKTDNFHD GLKGLLECRQ IYKSIGEGRS ECRSLKSIAT IYEYWSDVNK AFLIYQECID LATRHGDLAM LSNVYNPMSG LYLKRGDIET ATKLSDKSIA IKKKIKDERG LAYSIYGKGK VFFAQQKFAQ AETYFLQSLE LQQKFGDKLG AGMVLNKLGL TYVEQKKYLQ AEKILKQAVS LAEKHNVKVN VYKSYYSLYT LYKLQHKESN ALQCLEQFVL HKENNVQSHT SDIIRSYEAA NEIYRLEKDT KAQIDYLEIV QKKNTELDSF FYRVSHDLKG PISSLLGLNE LIEKEQFDGE ALKYFNMYKK LSTRIDAIVM DLITITRISS DKIVPVKIDF MQLIEDCIHS YAYFDNFEHI QFNIEVEEGI SFQSEWVIVN TILQNLIENS IKYMRHDVKK PYVFIQVYTQ GQMLCIKVTD NGQGISEEYQ EKIYEMFFRA NDKADGSGLG LYILKRAVER LQGTVSLKSK PGKGAAFTVC IKGE
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