Gene CHU_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1092 
SymbolarcB 
ID4187140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1269534 
End bp1271288 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content39% 
IMG OID638071091 
Productaerobic respiration sensor-response protein; histidine protein kinase 
Protein accessionYP_677709 
Protein GI110637502 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.962322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGGTA AGAAACAGGA AGTTCAGGAA GAATTGCTGG AAGAACAATT GGAAAAAGCC 
TATCAGGGCC GTATCAATAA TATAAAAGAA AGTTTTGCCG GCGTGCTTTC TGTTTTAAAA
ACAGCAAATA CAAAAAAGCT TGAACGCATA ACTGCCCGTT CGCACAATTA TCTGGGTTTG
CTGCATATGA TTCAGGGGAA TCATATAAAA TCAATTACAC ACTCCCGTCA GGCGCTGGAG
TATTTTCAAC GTGTTCAGAG CCTGAAAGAC ATTGCAGATG CTAAATTCAA TATTGCAAGT
TCTTTATATA AAACAGATAA TTTTCACGAT GGGCTGAAAG GTTTGCTGGA ATGCAGGCAG
ATCTACAAAA GCATTGGTGA AGGCAGAAGT GAATGCCGCA GTTTAAAATC CATTGCAACC
ATATATGAAT ATTGGAGCGA CGTCAATAAA GCGTTTCTCA TCTATCAGGA ATGTATTGAT
CTTGCTACCA GACACGGCGA TCTTGCCATG CTTTCAAATG TATATAATCC CATGTCTGGT
TTATACCTGA AGCGTGGTGA TATTGAAACA GCTACCAAAC TTTCCGATAA AAGCATTGCC
ATAAAGAAGA AAATTAAAGA CGAGCGCGGA CTGGCCTATT CGATCTATGG TAAAGGCAAA
GTATTTTTTG CTCAGCAGAA ATTTGCACAG GCTGAAACGT ATTTTTTGCA GAGCCTGGAA
TTACAGCAGA AGTTCGGTGA TAAACTCGGC GCGGGAATGG TATTAAATAA GCTTGGCTTA
ACCTATGTAG AGCAAAAAAA ATATCTGCAG GCAGAAAAGA TATTGAAGCA GGCCGTTTCA
CTTGCTGAAA AACATAATGT AAAAGTAAAT GTATATAAAT CGTATTACAG TTTGTATACC
TTATACAAAC TGCAGCATAA AGAATCGAAC GCGTTGCAGT GCCTTGAACA GTTTGTTTTA
CACAAAGAAA ATAATGTGCA GTCGCATACC TCAGATATCA TCAGAAGTTA TGAAGCTGCG
AATGAGATAT ACCGGTTGGA GAAAGACACA AAAGCACAGA TTGATTACCT GGAAATAGTA
CAGAAGAAAA ATACCGAGCT GGATTCTTTT TTTTACAGAG TCTCACACGA TCTCAAAGGC
CCCATTTCAT CACTTTTGGG ATTAAATGAA TTGATCGAAA AGGAACAGTT TGACGGTGAA
GCGCTCAAGT ATTTCAATAT GTATAAAAAG CTCTCCACCC GTATCGATGC GATTGTCATG
GACCTGATCA CCATCACACG TATCAGCTCC GACAAGATTG TGCCGGTAAA GATTGATTTT
ATGCAGCTTA TTGAAGACTG TATTCATTCG TATGCATACT TCGATAATTT TGAGCACATA
CAATTCAATA TTGAAGTTGA AGAAGGTATT TCTTTCCAAT CGGAATGGGT AATCGTAAAT
ACCATTCTGC AAAATCTGAT TGAGAACTCG ATCAAATACA TGCGCCACGA TGTAAAGAAG
CCTTATGTGT TTATACAGGT GTATACGCAG GGGCAGATGC TTTGCATTAA AGTGACAGAT
AACGGACAAG GAATCTCTGA AGAATACCAG GAAAAAATAT ACGAAATGTT TTTTCGTGCA
AACGATAAAG CAGACGGTTC CGGTTTAGGT TTGTATATAT TAAAGCGCGC CGTAGAACGT
CTGCAGGGAA CGGTTTCGTT GAAGTCCAAA CCTGGCAAGG GAGCTGCCTT TACTGTTTGT
ATCAAAGGGG AATAA
 
Protein sequence
MPGKKQEVQE ELLEEQLEKA YQGRINNIKE SFAGVLSVLK TANTKKLERI TARSHNYLGL 
LHMIQGNHIK SITHSRQALE YFQRVQSLKD IADAKFNIAS SLYKTDNFHD GLKGLLECRQ
IYKSIGEGRS ECRSLKSIAT IYEYWSDVNK AFLIYQECID LATRHGDLAM LSNVYNPMSG
LYLKRGDIET ATKLSDKSIA IKKKIKDERG LAYSIYGKGK VFFAQQKFAQ AETYFLQSLE
LQQKFGDKLG AGMVLNKLGL TYVEQKKYLQ AEKILKQAVS LAEKHNVKVN VYKSYYSLYT
LYKLQHKESN ALQCLEQFVL HKENNVQSHT SDIIRSYEAA NEIYRLEKDT KAQIDYLEIV
QKKNTELDSF FYRVSHDLKG PISSLLGLNE LIEKEQFDGE ALKYFNMYKK LSTRIDAIVM
DLITITRISS DKIVPVKIDF MQLIEDCIHS YAYFDNFEHI QFNIEVEEGI SFQSEWVIVN
TILQNLIENS IKYMRHDVKK PYVFIQVYTQ GQMLCIKVTD NGQGISEEYQ EKIYEMFFRA
NDKADGSGLG LYILKRAVER LQGTVSLKSK PGKGAAFTVC IKGE