| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1091 |
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| Symbol | hdhA |
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| ID | 4187139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1268568 |
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| End bp | 1269308 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638071090 |
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| Product | 7-alpha-hydroxysteroid dehydrogenase |
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| Protein accession | YP_677708 |
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| Protein GI | 110637501 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0983747 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATAAAT CAGAAAAGAA AACAGCGCTT GTTACCGGAG CGTCAAAAGG CATAGGAGCA
GAAATCGCGA AAGCGCTTGC CCGAAACGGA TCAACCGTTA TTGTAAACTA TTCCACAGAT
AGAATCAACG CTGAAGCGGT TGTTAAACAC ATTCGTGAAA ACGGAGGGGC GGCAACTGCT
ATTCAGGCAG ACGTTACAAA AGCGGCAGAA GTAAAACGGT TGTTTGAAGA AGCCTGTCAA
CAGTTCGGTA AAATAGATAC ATTGATTAAC AATGCAGGTG TCTATAAATT TGAACCCATA
GAAGCAGTTA CAGAAGAGGA ATTTCACCGG CAGTTCAACA GCAACGTATT GAGTGTACTG
TTGTCTGTTC AGGAAGCATT AAATTATTTT AACGAAGCTG GTGGAAGTAT CATTAATATC
GGTTCTGTTG CCAGTGTAAA AGCTACTCCG TCATCGCTGG TATATTCGGC AAGTAAAAGT
GCCGTAGATG GAATAACCCG GATTTTATCA AAAGAACTTG GTCCTAAAAA AATCCGCGTG
AACGCAATCT TACCCGGCCC CACTCATACA GAAGGCAACC GGATTGCAGG TACACCTGTG
GAAGAATATA TTGCAGCACA AACACCGCTG GGAAGAATCG GACAGCCCGC AGATATTTCC
ATGCTGGCGG TGTTCCTGGC TTCAGACGAT GCTTCCTGGA TCACCGGACA AAAAATATGT
GTGTCAGGTG GATTTGATTA A
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| Protein sequence | MYKSEKKTAL VTGASKGIGA EIAKALARNG STVIVNYSTD RINAEAVVKH IRENGGAATA
IQADVTKAAE VKRLFEEACQ QFGKIDTLIN NAGVYKFEPI EAVTEEEFHR QFNSNVLSVL
LSVQEALNYF NEAGGSIINI GSVASVKATP SSLVYSASKS AVDGITRILS KELGPKKIRV
NAILPGPTHT EGNRIAGTPV EEYIAAQTPL GRIGQPADIS MLAVFLASDD ASWITGQKIC
VSGGFD
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