| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1079 |
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| Symbol | clpA |
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| ID | 4184356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1254397 |
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| End bp | 1256943 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638071078 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit |
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| Protein accession | YP_677696 |
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| Protein GI | 110637489 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.258096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCAA AATTTTCAAA TCGGGTAAAA GAGGTGATTT CCTTAAGCCG GGAAGAAGCA
TTGCGCTTGG GTCATGATTA CATTGGTGCC GAACACCTGT TGTTAGGAAT GATTCGCGAA
GGAGAAGGTG TGGCAATTAG TTTATTAAAA AAACTAGGCA TCACGTTAGA TTCTTTAAAA
AAGTCGCTAG AAGAAGCCGT TCGTGGAACA GCTACTGGTA ACGTTAAAAA CCTTACCAAT
ATTCCTCTGA CAAGACAGGC AGAAAAAGTA TTAAAGATTA CATATCTGGA AGCAAAGATC
TTCAAAAGTG ATCTTATTGG TACAGAACAT TTATTGTTAT CTGTATTGAG AGATGAAGAT
AATGTTGCTA CACAAATATT AAACAAATTT GATATTACGT ATGATGTTAT CAAGGAATTG
CTTGAATACC ATACGCACAC ACCAAAAGCT ACAGATGCTG AAGATGCAGA TGACGATTCA
TCTCGTTTGT TCGGTAACAG CGGTTCTGGT GCGGGTAAAG AAGCAGCTCG TCCGGGTGCT
GAAAAATCAA GAACACCTGT ACTTGATAAC TTCGGCAGAG ATTTAACAAA ATACGCGGAA
GATGGAAAAC TTGATCCGAT CATTGGTCGT GAAAAAGAAA TCGAACGTGT TGCGCAAATC
TTGTCCCGTC GCAAAAAGAA TAACCCGATC CTGATCGGTG AACCGGGTGT GGGTAAAACA
GCTATCGCTG AAGGTCTTGC ATTACGTATT GTTCAGAAGA AAGTATCACG TGTTTTATTC
GGTAAACGTG TAGTAACATT GGATCTGGCT TCATTGGTGG CAGGTACAAA ATACCGCGGT
CAGTTTGAAG AGCGTATGAA AGCAGTTATG AATGAACTGG AAAAATCTCC TGAGGTTATT
CTGTTTATTG ATGAGATTCA TACCATTGTT GGTGCAGGCG GTGCTTCCGG TTCATTGGAT
GCATCGAACA TGTTTAAACC GGCATTGGCG AGGGGAGACA TACAATGTAT TGGTGCTACT
ACCTTAGATG AGTACCGTCA GTACATCGAA AAAGATGGTG CTTTGGCTCG TCGTTTCCAG
ATTGTAATGG TAGATGCAAC AACACCGGAA GAGACTGTTC AGATTTTGAA CAACATCAAA
GAGAAATACG AAGATCACCA TAATGTAATT TATTCTCCGG AAGCATTGGA AGCTTGCGTT
AAGTTATCGG ATCGTTATAT CAGCGACCGT TTCTTACCGG ATAAAGCAAT TGATGTGTTG
GATGAAGCAG GTGCCCGTGT ACACATTAAC AATATTCACG TTCCTGCAGA TATCCTGAAA
CTGGAAGAGC AGATTGAGAA TATCAAAAAA GAAAAAAACA AAGTTGTTAA AAGTCAGAAA
TACGAAGAAG CTGCTCAATT GAGAGACTCT GAGAAAAAAC TGATCGAACA GTTGGATAAC
GCCAAACTTC GTTGGGAAGA AGAAACCAAG AAGAAACGTT ACCATGTAAA AGAAGAGAAC
GTTGCAGAAG TAATTGCCAT GATGACGGGT ATTCCTTCTG CACGTGTTGC GCAGAAAGAA
TCATTGAAAC TGTTAAGCAT GGGGTCTGAT CTGAAGGCTG CCGTTGTTGG ACAGGATCAG
GCAATTGAAA AATTAGTAAA AGCCATTCAA CGTACACGTG TAGGGTTAAA AGATCCGAAG
AAACCGATTG GTTCATTCAT CTTCTTAGGT CCGACAGGTG TTGGTAAAAC TGAATTAGCG
AAGTCTCTTG CTAAATATTT ATTCGATAAA GAAGATTCGC TGGTACGTAT TGATATGTCT
GAGTATATGG AGAAATTCTC TGTATCGAGA TTGGTTGGTG CGCCTCCGGG ATATGTCGGA
TACGAAGAAG GTGGTCAGTT GACTGAGAAA ATCCGTCGTA AGCCATACAG TGTTGTATTG
CTTGATGAGA TTGAGAAAGC GCACCCGGAT GTATTTAACT TAATGCTTCA GGTATTGGAT
GACGGTATCT TAACAGATGG TTTAGGGAGA AGAGTAGATT TCAGAAATAC AATCATCATC
ATGACATCAA ACATTGGTGT TCGTGACTTG AAAGATTTCG GATCAGGTAT CGGTTTCAAT
ACACAATCCC GTAAAGAGAA TGTAGATGAA ATGATGAAAG GTACGATCCA GAATGCCTTA
CGTAAAGCAT TCTCTCCTGA ATTCTTAAAC CGTTTGGATG ATGTAATTGT ATTCAACTCT
TTAACAAGAG AAGATATTCA TGTAATCATC GATATCACGT TGGCAAAAGT ATTCTCAAGA
ATCACAACAT TGGGTTATAC AATTGAATTA ACGGATAAAG CGAAGGATTT CTTAGCGGAA
AGAGGTTATG ACCAGCAATA TGGTGCGCGT CCGTTGAACC GAGCGATACA GAAATATCTT
GAAGATCCGA TTGCAGAAGA AATTCTGAAA GGAGATGTTC AGGAAGGTGA TACAATCTTA
GCTGACTACA AAGAAGGTGC AGATGGTTTA ACTGTTCGCA ATAAAAAACA AGCCGAAGAA
ACAACGGAAG GCGAAAAAGA AAAATAA
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| Protein sequence | MEAKFSNRVK EVISLSREEA LRLGHDYIGA EHLLLGMIRE GEGVAISLLK KLGITLDSLK
KSLEEAVRGT ATGNVKNLTN IPLTRQAEKV LKITYLEAKI FKSDLIGTEH LLLSVLRDED
NVATQILNKF DITYDVIKEL LEYHTHTPKA TDAEDADDDS SRLFGNSGSG AGKEAARPGA
EKSRTPVLDN FGRDLTKYAE DGKLDPIIGR EKEIERVAQI LSRRKKNNPI LIGEPGVGKT
AIAEGLALRI VQKKVSRVLF GKRVVTLDLA SLVAGTKYRG QFEERMKAVM NELEKSPEVI
LFIDEIHTIV GAGGASGSLD ASNMFKPALA RGDIQCIGAT TLDEYRQYIE KDGALARRFQ
IVMVDATTPE ETVQILNNIK EKYEDHHNVI YSPEALEACV KLSDRYISDR FLPDKAIDVL
DEAGARVHIN NIHVPADILK LEEQIENIKK EKNKVVKSQK YEEAAQLRDS EKKLIEQLDN
AKLRWEEETK KKRYHVKEEN VAEVIAMMTG IPSARVAQKE SLKLLSMGSD LKAAVVGQDQ
AIEKLVKAIQ RTRVGLKDPK KPIGSFIFLG PTGVGKTELA KSLAKYLFDK EDSLVRIDMS
EYMEKFSVSR LVGAPPGYVG YEEGGQLTEK IRRKPYSVVL LDEIEKAHPD VFNLMLQVLD
DGILTDGLGR RVDFRNTIII MTSNIGVRDL KDFGSGIGFN TQSRKENVDE MMKGTIQNAL
RKAFSPEFLN RLDDVIVFNS LTREDIHVII DITLAKVFSR ITTLGYTIEL TDKAKDFLAE
RGYDQQYGAR PLNRAIQKYL EDPIAEEILK GDVQEGDTIL ADYKEGADGL TVRNKKQAEE
TTEGEKEK
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