| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1052 |
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| Symbol | |
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| ID | 4185010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1215848 |
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| End bp | 1218331 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638071051 |
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| Product | hypothetical protein |
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| Protein accession | YP_677669 |
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| Protein GI | 110637462 |
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| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
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| COG ID | [COG1858] Cytochrome c peroxidase
[COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.255534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATTC CGGTTCGTCG ATTTACACCT AATGCATACA TCATGAGGAT ACTCGTTTCT
ATAATTGTGT TTTTATGTAT CGGCTGGATC GGGAGGGTAA CTGAGCTGGA AGAGAATTTC
ATTACCCAGA ACAAGCCGGT AGAGGTTGGT ACATTTGTCA CCTTTACCAT AAATATTCCG
GATGGTTCTG AAATTCCATA TGTTGCATGG GATTTTGGTG ATGGCAGTGG TCTGGGTAGA
TATAGGAAAA GTTTGAGTGT TTCTTACACC TTTACTGAAC CAGGAGTGTA TCAGGTATAT
GCGAGGATAC AGGGAGAGGA TTTTCCGCTT ACAGTTATTC AAACGGTTTA CAAGCCAACT
CAAAAGCCTG CTCCTGCACA TTCGTCAACA ATTGTTATCG ATACCGTTCA TCAAAAAGTA
TGGGCTGTTA ATACAGATAA TAATTCCGTT GCCTATATAG ACGCTTTGAA TAATACACTT
CTTTCCGAAA TCCCAGTCGG TAAGCAGCCA AGGACGGTAG CGTTAGATAA AGATGGTAAT
GCCTGGGTTG CCAACGAAGA GGATGCAAGC ATTTCAGTAA TAGCTGCTGC TACAGGTCAG
GTACTTCAAA CGATCATACT GCCATATGCA TCACGGCCAT ACGGGATTTG TTTTGATCCT
CAAAAAGATT TTTGTTATGT AACATTACAG GGTACCGGAG AACTTGTAAA GATTGAAGCG
ATTGGGAGAG AAATTGTAGA ATCGGTTCAT GTTGGAAGAA GTCCCCGGGG TATTGCTGTC
ACATCTGATG GTAGCCAAAT GTTAGTTACG CAATTTATTT CTCCAGAAGA AAATGGACTG
GTACGTTTAA TTGATACTAA GACAATGCAT GTGCAGCAAG AAATTGTGTT GGCATTTGAT
GTTACTCCGG ATTTTGAAGA CAGGGGACGA GGTGTTCCCA ATTTTTTGTC TTCTATTACA
ATAACACCGG ATGGAACGGA AGCATGGGTG CCTTCGAAAA AAGACAATAC AGCCAGGGGT
ATGTTTAGAG ATGGCTTAGC ACTTGAGTTT GATAATACCG TTCGCACGAT TGTTTCAAGG
ATTGATCTAT CTACCATGAC GGAAAATTCT CAAATGAGGA CAGATATCAA TGATGCAGAT
ATGGCTTGTG CAGTAGAGTT CAGCCCGTAT GGTAATATAG CTTTTGTTGC TTTGCAAGGG
GTTAACAAGA TCACGATGAT AGATGTTGCT TCCAATTCCA GATTGGGTTT GCTTGATTCA
ACCGGCCTTG CTCCTCAGGG TTTAGTTATT AATGCCGATG GTTCACGACT ATTTGTACAT
AATTTTCTTA CCAGAACCGT AAAAGTTTTT AATACGGAGG ATATTGTGCT ATCAAATAAT
TTTACTCCTG TAGTAGCAGC AACCATATCA ACGATCATTA CTGAGAAGCT TGCTCCTCAG
GTATTGGAGG GGAAACAGAT ATTTTATAAT GCGGCTGACG AACGAATGAC ATTCGCCGGA
TATATAAGCT GTGCGTCCTG TCATCTGGAT GGTGCCAGCG ATGAACGGGT GTGGGATTTT
ACGGATAGAG GAGAAGGATT TAGAAATACA CATAGTCTTT TGGGAAGGGG TGGTATGGAT
ATGGGTAATG TACACTGGAC TTCTAACTTT GATGAGATTC AGGATTTCGA AAATGATATG
CGAAATGGTT TTAAAGGAAA AGGATTTTTG CCTGATGCTG TGTTCGCCTT GGTTTCAGAT
CCACTGGGTA ATCCGAAGGC AGGATTGAGT AGGGAGCTGG ATGCATTGGC AGCATATGTT
ACGTCTTTGA ATAAAGTTCA TGCAAGTCCT TACCGCAATA ACGATGGAAG CCTAACGGCA
GACGGGATTG AAGGGGAAAT TCTTTTTCAG GAATTGGGTT GTGGGTCTTG TCATGCAGGT
CAGGACTTTA CAGACAGAAA AACCGGAGTT CTGCATGATG TTGGTACTGA GCAACCATCC
TCCGGTGAAA GACGAACGTT AGCATTGACT GGTTTTGGCA CCCCAACATT AAAGGGCATT
TGGGAAACAG CTCCATATCT GCACGATGGT TCGGCACTTA CACTTAAAGA TGTGCTTGTT
ACAAGAAATG CAGAGAAGAA GCATGGAGAT CTTTCGAATT TAACAGAAAC AGAATTGGAT
AAACTTGTAG CATATTTACT TCAGATTGAC GATAACCAGG ACGCAGTGAT AACCGCGTTG
CTGTTTCCGA TTAAAAGAGA ATTTGTAGCT ATGAGAATAT TTCCCAATCC AGCTTCCGAA
AGCGCTAACG TACAATTAAC CAACATTGTC AAATCATCAG GGACAATCAG AATTTACAAC
GTTATTGGAC ATCTATTGAT GACAGTATTG GTAGAGGGTA TGAATGAAAT AAATCTGGAT
GTCAGCCAAC TCAATAGCGG AGTTTATGTG GTAGAGTATT CAGATGATAC CAGTAAATAC
AGTCAAAAAA TGGTTATACA ATAA
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| Protein sequence | MIIPVRRFTP NAYIMRILVS IIVFLCIGWI GRVTELEENF ITQNKPVEVG TFVTFTINIP
DGSEIPYVAW DFGDGSGLGR YRKSLSVSYT FTEPGVYQVY ARIQGEDFPL TVIQTVYKPT
QKPAPAHSST IVIDTVHQKV WAVNTDNNSV AYIDALNNTL LSEIPVGKQP RTVALDKDGN
AWVANEEDAS ISVIAAATGQ VLQTIILPYA SRPYGICFDP QKDFCYVTLQ GTGELVKIEA
IGREIVESVH VGRSPRGIAV TSDGSQMLVT QFISPEENGL VRLIDTKTMH VQQEIVLAFD
VTPDFEDRGR GVPNFLSSIT ITPDGTEAWV PSKKDNTARG MFRDGLALEF DNTVRTIVSR
IDLSTMTENS QMRTDINDAD MACAVEFSPY GNIAFVALQG VNKITMIDVA SNSRLGLLDS
TGLAPQGLVI NADGSRLFVH NFLTRTVKVF NTEDIVLSNN FTPVVAATIS TIITEKLAPQ
VLEGKQIFYN AADERMTFAG YISCASCHLD GASDERVWDF TDRGEGFRNT HSLLGRGGMD
MGNVHWTSNF DEIQDFENDM RNGFKGKGFL PDAVFALVSD PLGNPKAGLS RELDALAAYV
TSLNKVHASP YRNNDGSLTA DGIEGEILFQ ELGCGSCHAG QDFTDRKTGV LHDVGTEQPS
SGERRTLALT GFGTPTLKGI WETAPYLHDG SALTLKDVLV TRNAEKKHGD LSNLTETELD
KLVAYLLQID DNQDAVITAL LFPIKREFVA MRIFPNPASE SANVQLTNIV KSSGTIRIYN
VIGHLLMTVL VEGMNEINLD VSQLNSGVYV VEYSDDTSKY SQKMVIQ
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