Gene CHU_1017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1017 
Symbol 
ID4183754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1165077 
End bp1165550 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content34% 
IMG OID638071015 
Producthypothetical protein 
Protein accessionYP_677634 
Protein GI110637427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTT TGGATGAAGG CATTCTTAAT TTATGGAAGA ACCTTCATGA CTATAATGTG 
AAGTATATTA TGGTGGGAGG CTTTGCAACG AACTTGCATG GATTTTCCAG AACTACGGAT
GATTGTGATA TCTGGATTGA AGATACGCCA GCAAATCGAA ATAATCTGCG TACAGCACTT
GAAAAAAATG AAGGGCTTGA TTTTAGTGCC GTTGAAAGAA TGGAATTTGT ACCAGGCTGG
TCTTCTATTC AATTACAATC AGGCTTATCT CTTGATATAA TGACATATCT GAAAGGCTTT
CCGCAAGAAG CTTTTGAAAA TTGTTATAAC CAGGCATCTG AAGCATTGTT ATATGATTTA
ACCATACGTT TTTTACAATT AAATCATTTG ATCGAAGCAA AAAAACAAAC CGGTCGACCA
AAAGATTTAA TTGATGTTAT AGAACTGGAA AAAATTCAAA AAGGGAATGT TTAA
 
Protein sequence
MDILDEGILN LWKNLHDYNV KYIMVGGFAT NLHGFSRTTD DCDIWIEDTP ANRNNLRTAL 
EKNEGLDFSA VERMEFVPGW SSIQLQSGLS LDIMTYLKGF PQEAFENCYN QASEALLYDL
TIRFLQLNHL IEAKKQTGRP KDLIDVIELE KIQKGNV