Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0985 |
Symbol | |
ID | 4183527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1131436 |
End bp | 1132146 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638070982 |
Product | hypothetical protein |
Protein accession | YP_677602 |
Protein GI | 110637395 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.108599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCGTT ATAAAGACAT ACACATCCCC AAACCTTGCT CTGTGAACTA TGATGCGCTG CCCGGCGATG AAATGAAACG CCTTTGCAGT AATTGTAAAG AGCATGTATA TGATTTCAGA GGGAAGAATG AAGCGTATTT AAATAAGGTA TTCAACACTC ACGGAAAAGT GTGTGGCGTG TATTATGAAG ATCAAATACA AAAACCAAGC ATACGTATAG AACGTCCATT TTATTATACA CTCGTAACAA AAGCTGTAAG TATAGCTCTT TTCGTCAAAA CTTTTTTAAC TAGTCATCAT ACAGATGCTT CAACTACATA TTACCCACCT GTACATTACG AACAGCAGGA TAGTATAGCT GCAATCAAAG CACAGTTTAA AAACAAGCCA AAAAAATACA ACTCGTATAC CATCAGTATT TATATTAACA CTGTCTTATA CAAAAAGAAC ATATCTGTAT ATGATGGTTA TTTGTTTATG CCCGATGCAA CATCTCCGGA TGACAGCATT AAAATTATAG TACACAAAAA GAAAGCCCTG CGATATCACA ATGTATCGCA CTCTATAAAA CACAAAGAGT ATTTATTTAC ATTTAAAGAA GCAGATAAAA TTGTTGTTGA AATAGATTAT AAATTTCATT TTACATTGAT CAAAAAAAGA CAGATCAGAG GCAAACGCAG AAGTGTTGTG GGAGATTATA GAGATTATTA A
|
Protein sequence | MIRYKDIHIP KPCSVNYDAL PGDEMKRLCS NCKEHVYDFR GKNEAYLNKV FNTHGKVCGV YYEDQIQKPS IRIERPFYYT LVTKAVSIAL FVKTFLTSHH TDASTTYYPP VHYEQQDSIA AIKAQFKNKP KKYNSYTISI YINTVLYKKN ISVYDGYLFM PDATSPDDSI KIIVHKKKAL RYHNVSHSIK HKEYLFTFKE ADKIVVEIDY KFHFTLIKKR QIRGKRRSVV GDYRDY
|
| |