Gene CHU_0931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0931 
SymbolribA 
ID4184119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand+ 
Start bp1067658 
End bp1068875 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content44% 
IMG OID638070930 
Productbifunctional protein: GTP cyclohydrolase II; 3,4 dihydroxy-2-butanone-4-phosphate synthase 
Protein accessionYP_677550 
Protein GI110637343 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones5 
Fosmid unclonability p-value0.0340285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGA TAAAATTAGA TTCAATAGCG GACGCCATTG AAGCCATTCG TAAAGGTGAG 
GTGATTATTG TTGTTGACGA TGAAGACAGG GAAAACGAAG GTGATTTTAT TTGTGCGGCA 
GAATGTGTTA CGCCCGAGAT TATCAACTTC ATGTCTAAGG AAGGAAGAGG ATTAATTTGT 
GCACCCATAT CGGAAGCACG TTGTACAGAA CTGAAGCTGG ACCTGATGGT AGGCAGCAAT 
ACAGCTACAC ATGAAACACC GTTTACTGTT TCGGTAGATT TATTAGGAAA CGGATGTACT 
ACGGGTATCT CGGCTTCTGA CCGTTCAAAA ACAATCCGTG CGCTGGTTGA TCCGGATACA 
AAACCGGAAG ACCTGGGTCG CCCGGGACAT ATATTTCCGT TGAAAGCAAA AGATGAAGGC 
GTGCTGCGCA GAGTGGGACA TACAGAAGCA GCCGTAGATC TGGCGCGTTT AGCCGGGTTT 
AAACCTGCCG GTGTGTTGAT CGAAATTATG AGTGAAGATG GCAGCATGGC ACGTTTGCCG 
GAGCTGAAAC AGATAGCAAC AAAATTCAAT CTGAAATTAA TTTCAATTAA GGATCTTATT 
GAATACAGAC TTACGCATGA AAGCCTTGTA AAAAGAGAGA TTGGCGTTGA CATGCCAACC 
AATCTGGGCG ACTTTGATCT GATTGCTTTC CGCCAGATCA GTACAGGTGA AGTACATTTA 
GCGTTAATTA AAGGCACCTG GGAAAAAGAC GAACCTGTAA TGGTACGTGT ACATTCCTCG 
TGTGTTACAG GCGACATCTT CGGCTCGTGC CGCTGCGACT GTGGTCCGCA GTTGCATAAG 
GCCATGGAGA TGATTCAGCA AGAAGGCAAA GGCGTTATTC TGTACATGAA TCAGGAAGGT 
CGTGGTATTG GTTTGCTGAA TAAATTAAAA GCATATAAAC TTCAGGAACA GGGAAGAGAT 
ACGGTTGAAG CAAATTTAGA GTTAGGGTTT AAAATGGATC AGCGCGATTA CGGTACAGGC 
GCACAGATAT TAAGAGATCT CAACATTTCC AAGTTGCGTT TGATAACAAA TAATCCGGTT 
AAACGTGCAG CTCTTGCAGG ATACGGTTTA GAGATCACCG AAGCAGTGCC TATTGAAATT 
CCTTCTAATC CGCACAACCT GGAATACTTA AAAACGAAAC GGGATAAAAT GGGACATACA 
ATTCTGAAAA AGGATTAA
 
Protein sequence
MEQIKLDSIA DAIEAIRKGE VIIVVDDEDR ENEGDFICAA ECVTPEIINF MSKEGRGLIC 
APISEARCTE LKLDLMVGSN TATHETPFTV SVDLLGNGCT TGISASDRSK TIRALVDPDT 
KPEDLGRPGH IFPLKAKDEG VLRRVGHTEA AVDLARLAGF KPAGVLIEIM SEDGSMARLP 
ELKQIATKFN LKLISIKDLI EYRLTHESLV KREIGVDMPT NLGDFDLIAF RQISTGEVHL 
ALIKGTWEKD EPVMVRVHSS CVTGDIFGSC RCDCGPQLHK AMEMIQQEGK GVILYMNQEG 
RGIGLLNKLK AYKLQEQGRD TVEANLELGF KMDQRDYGTG AQILRDLNIS KLRLITNNPV 
KRAALAGYGL EITEAVPIEI PSNPHNLEYL KTKRDKMGHT ILKKD