Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0907 |
Symbol | |
ID | 4186375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1037662 |
End bp | 1038204 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638070907 |
Product | putative colanic acid biosynthesis acetyltransferase WcaF |
Protein accession | YP_677528 |
Protein GI | 110637321 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00617955 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATCAGG ATCTTTCTCG TTTTTCAATG CCTGCTGATT TCAGAGGTAA ACCCGGTTGG TATGTACAGT TGTGGTGGGT TGTTCAGGCG CTCTTATTTC ATCCTTCGCC TCAAATTATG TATGGCTGGC GCCGGTTATT ACTGCGGGCT TTTGGAGCGC AGATCGGTAA AGGTGTAATC ATACGTCCTT CTGCACAAAT CACCTATCCA TGGAAATTAG CTATTGGAGA TTATGCATGG ATAGGGGATG AAGTTGTGTT ATATACGCTG GGTAATATAA CAATCGGTAA GAATGCTGTA GTATCCCAAC GTTCATACAT TTGTACGGGC AGCCATGATT TCAAAAAAGA AGCATTTGAT ATTTTTTCAA AACCAATAAT TATTGACGAT GAATGCTGGC TGGCGACAGA TGTGTTTGTT GGTCCCGGTG TTAAAATTAG TAAGGGAATA GTAATTGGTG CGCGCAGCAG TGTATACAAA AATATTGAAG CCACACCCGG TATTTATACA GGAAACCCCG CAACCCGTGT TGGGGATCGG TAG
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Protein sequence | MYQDLSRFSM PADFRGKPGW YVQLWWVVQA LLFHPSPQIM YGWRRLLLRA FGAQIGKGVI IRPSAQITYP WKLAIGDYAW IGDEVVLYTL GNITIGKNAV VSQRSYICTG SHDFKKEAFD IFSKPIIIDD ECWLATDVFV GPGVKISKGI VIGARSSVYK NIEATPGIYT GNPATRVGDR
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