Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0896 |
Symbol | |
ID | 4186364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1024508 |
End bp | 1025299 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638070896 |
Product | b-glycosyltransferase |
Protein accession | YP_677517 |
Protein GI | 110637310 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000325648 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATC TTACTGTATT AATCATTACG TATAATGAAG ACCCGAATAT TCATCGGGTG CTGGAAAAGC TGCGTTGGGC TGAAAAAATA GTGTTGCTCG ATAGCGGAAG TACAGATGAA ACATTGTCTA TAGCCGGTAC ATTTTCAAAC GTAGAGGTTG TTTACAGAAA ATTTGATTCT TTTGCTGAAC AATGCAATTT TGGGTTAAGT CTGATAAAAA CAGAATGGGT GTTGTCTCTT GATGCAGATT ATGTATTAAC GGAGCCATTA ATTGCAGAAA TAAAGCATGC TGTTACTGAC ACAACAGTGG ATGCCTGGAA CGTATGTTTT CGCTTTTGTG TATATGGATA TCCGCTACGT TCAGATAACA CAACACCCAG GCCAATACTA TTTCGTACAT TGAAAGGTAA TTATTATAAT GATGGTCACG CACACAGACT TGCCGTTCAG GGCAAGGAAA GTAATTTTAA AAATAAAATT TTACATGATG ATCGTAAAGA TCTGAGTCGC TGGTTTAAAA ACCAGGATAG TTACGCTCTA AAGGAGTGTC AGAAGCTTAT TCAAAAACCA TACGAGGAAC TACGCCCTAT TGATAAGATC CGAAAATTGA AATGGATTGC ACCGTTTATG GTGTTCTTTT ATTCTCTATT TATAAAAGGG TTAATTCTTG ATGGTTGGCA CGGGTGGTAT TATACATTAC AACGTACCAT GGTAGAAATT ATGTTTACGC TGCGTTTAAT TGAAGCAGAA AAAATTAATA AGCAAGCAAA AGAATACGCT AAGACAAAAT AG
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Protein sequence | MNNLTVLIIT YNEDPNIHRV LEKLRWAEKI VLLDSGSTDE TLSIAGTFSN VEVVYRKFDS FAEQCNFGLS LIKTEWVLSL DADYVLTEPL IAEIKHAVTD TTVDAWNVCF RFCVYGYPLR SDNTTPRPIL FRTLKGNYYN DGHAHRLAVQ GKESNFKNKI LHDDRKDLSR WFKNQDSYAL KECQKLIQKP YEELRPIDKI RKLKWIAPFM VFFYSLFIKG LILDGWHGWY YTLQRTMVEI MFTLRLIEAE KINKQAKEYA KTK
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