Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0885 |
Symbol | |
ID | 4185237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1011843 |
End bp | 1012997 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070885 |
Product | a-glycosyltransferase |
Protein accession | YP_677506 |
Protein GI | 110637299 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00174495 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACATAC TATTTATATC AAAGAACTTT CCGCCTGCAG TATGTGGTGT AGGGGATTAT ACATTCCAGC TGGCAAAAGA ATTTATAAAA AATGGTCATG CCGTTACTGT ACTTACGCAG AAAACGGATA ATACTATAGC TGTACAGGGT ATGAATATTC TGCCTGTAAT TTCCTCTTGG AACATAAAAG CTGTTTTTAA AATAGCCGCT ATCTGCAAAA CAGTAAAGCC GGATTATATA TCCATGCAAT ACGTACCGTA TAGTTTTAAT GCTAAAGGGA TGCCTTTTTG GCTAATCCTG CTTTATATGG TATTGAAAAT AAAAGGGTTT AAAATTGTTA CAACATTTCA TGAAGTAGGT ATCAGATATA CGGCAAAAAG TTTCAAGCGG AAAATAATTG CAGCTGCTCA GTTTTTTATT GCACGTATCT TGTCCCGGTA TTCCTTCAAA AACATTACCA GCATTGATCT GTATGTCAAT TACCTGAAAA GATATACCGA CGCTGTATTT AAAATACCTG TTGGTGCAAA TATTCTCCCC TATACGGTTG ACTCAAGCAC GATCAGCCAA TTGAGAAATA CAATTGCACA TCCGGAATCC TTTATTCTTT CAACCTTCGG GACACGAATT TCAGATACGA TTCTAATGGC TTTTGCGGAA GTTAAAAAGC AACATCCCGA TACTGTATTA ATCATATTAG GAAATATACC GAAAGCTACA AAACAGCATT TTACATCTAA ATCTCAGGAG CTGGGTATTG ATGCAAGTAT TCATATTACA GGATATCTGT CTGATGAAGC ACTCTATACA CATTTAAAGC TTTCTTCTTT ATTTGTAATG GCTGAGTATG TAAGTGAAAA AGGCGAAGGT GGGATTGCTA CAAAAAGCGG TTCGCTGGCG GCAGCTTTTG CAGCAGGTAT TCCTGTTCTG GGTACACGCG GCGATACTAC AGATGCCGTA TTCAGGGATA ATGAGAATAT ATTTTTAATG AATGATTACT CTGTTGACCA AACAGCTAAA CGTATTTCTG AAATTATCAA TAATCAGGCG TGGTTACAGA CTATCGCTGC GGAGGCTCGG AAAACGTTTG CGTCAGAATT CTCATGGGAG AAAATTTATG AAAGGTATTG GGAAGTGTAT TCGATGCCTG ATTGA
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Protein sequence | MHILFISKNF PPAVCGVGDY TFQLAKEFIK NGHAVTVLTQ KTDNTIAVQG MNILPVISSW NIKAVFKIAA ICKTVKPDYI SMQYVPYSFN AKGMPFWLIL LYMVLKIKGF KIVTTFHEVG IRYTAKSFKR KIIAAAQFFI ARILSRYSFK NITSIDLYVN YLKRYTDAVF KIPVGANILP YTVDSSTISQ LRNTIAHPES FILSTFGTRI SDTILMAFAE VKKQHPDTVL IILGNIPKAT KQHFTSKSQE LGIDASIHIT GYLSDEALYT HLKLSSLFVM AEYVSEKGEG GIATKSGSLA AAFAAGIPVL GTRGDTTDAV FRDNENIFLM NDYSVDQTAK RISEIINNQA WLQTIAAEAR KTFASEFSWE KIYERYWEVY SMPD
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