Gene CHU_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0885 
Symbol 
ID4185237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1011843 
End bp1012997 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content38% 
IMG OID638070885 
Producta-glycosyltransferase 
Protein accessionYP_677506 
Protein GI110637299 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00174495 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACATAC TATTTATATC AAAGAACTTT CCGCCTGCAG TATGTGGTGT AGGGGATTAT 
ACATTCCAGC TGGCAAAAGA ATTTATAAAA AATGGTCATG CCGTTACTGT ACTTACGCAG
AAAACGGATA ATACTATAGC TGTACAGGGT ATGAATATTC TGCCTGTAAT TTCCTCTTGG
AACATAAAAG CTGTTTTTAA AATAGCCGCT ATCTGCAAAA CAGTAAAGCC GGATTATATA
TCCATGCAAT ACGTACCGTA TAGTTTTAAT GCTAAAGGGA TGCCTTTTTG GCTAATCCTG
CTTTATATGG TATTGAAAAT AAAAGGGTTT AAAATTGTTA CAACATTTCA TGAAGTAGGT
ATCAGATATA CGGCAAAAAG TTTCAAGCGG AAAATAATTG CAGCTGCTCA GTTTTTTATT
GCACGTATCT TGTCCCGGTA TTCCTTCAAA AACATTACCA GCATTGATCT GTATGTCAAT
TACCTGAAAA GATATACCGA CGCTGTATTT AAAATACCTG TTGGTGCAAA TATTCTCCCC
TATACGGTTG ACTCAAGCAC GATCAGCCAA TTGAGAAATA CAATTGCACA TCCGGAATCC
TTTATTCTTT CAACCTTCGG GACACGAATT TCAGATACGA TTCTAATGGC TTTTGCGGAA
GTTAAAAAGC AACATCCCGA TACTGTATTA ATCATATTAG GAAATATACC GAAAGCTACA
AAACAGCATT TTACATCTAA ATCTCAGGAG CTGGGTATTG ATGCAAGTAT TCATATTACA
GGATATCTGT CTGATGAAGC ACTCTATACA CATTTAAAGC TTTCTTCTTT ATTTGTAATG
GCTGAGTATG TAAGTGAAAA AGGCGAAGGT GGGATTGCTA CAAAAAGCGG TTCGCTGGCG
GCAGCTTTTG CAGCAGGTAT TCCTGTTCTG GGTACACGCG GCGATACTAC AGATGCCGTA
TTCAGGGATA ATGAGAATAT ATTTTTAATG AATGATTACT CTGTTGACCA AACAGCTAAA
CGTATTTCTG AAATTATCAA TAATCAGGCG TGGTTACAGA CTATCGCTGC GGAGGCTCGG
AAAACGTTTG CGTCAGAATT CTCATGGGAG AAAATTTATG AAAGGTATTG GGAAGTGTAT
TCGATGCCTG ATTGA
 
Protein sequence
MHILFISKNF PPAVCGVGDY TFQLAKEFIK NGHAVTVLTQ KTDNTIAVQG MNILPVISSW 
NIKAVFKIAA ICKTVKPDYI SMQYVPYSFN AKGMPFWLIL LYMVLKIKGF KIVTTFHEVG
IRYTAKSFKR KIIAAAQFFI ARILSRYSFK NITSIDLYVN YLKRYTDAVF KIPVGANILP
YTVDSSTISQ LRNTIAHPES FILSTFGTRI SDTILMAFAE VKKQHPDTVL IILGNIPKAT
KQHFTSKSQE LGIDASIHIT GYLSDEALYT HLKLSSLFVM AEYVSEKGEG GIATKSGSLA
AAFAAGIPVL GTRGDTTDAV FRDNENIFLM NDYSVDQTAK RISEIINNQA WLQTIAAEAR
KTFASEFSWE KIYERYWEVY SMPD