Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0699 |
Symbol | murF |
ID | 4186474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 797583 |
End bp | 798863 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638070705 |
Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
Protein accession | YP_677326 |
Protein GI | 110637119 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTAG CATTTTTGTA TGAAAGCTTT TTAGAAAGCC GTTCCGTTAC CACAGATACA AGAAAAGTAA AAAACGGAGA TTTATTCTTC GCGTTAAAAG GACCTAATTT TAATGGAAAT ACCTTCGCTG CAACTGCTTT GGAAATGGGG GCAGCGTATG TTGTTGTTGA TGAAGCAGAA GTAGTGCAGG ACGATCGCTA TGTACTGGTA GATGATGTAC TTACAACCTT GCAGCAGCTC GCTAACCTGC ACCGCCGCAC ACTCGGCATT CCCATTCTTG CTATTACAGG CTCAAATGGC AAAACCACAA CCAAAGAATT GGTGAATGCC GTGATGAGCA AAAAATATAA AACCTATGCC ACGGTTGGCA ATCTGAATAA TCACATAGGT ATTCCGTTAA CATTGCTTGC CATGGATGAA AGCATTGAAT TCGGGATTGT TGAAATGGGG GCAAACCACC AGAAAGAAAT TGCTTCGTAT TGCAGCTTTG TTGAACCAAA CTATGGTTTG ATTAATAATG TGGGTAAAGC ACACCTGGAA GGCTTCGGCG GTTTTGAAGG CGTGAAAAAA GGTAAAGGGG AATTGTATCA GTATTTATTT GAAACAAACG GCATTGCCTT TATCAATTCT AAAAACGAAC ACCTGATGGA AATGTCGCCC TTTGAAGCAC CGGTTTTGTA TGGCCGCAAC AGTGATTTCT ACAATGCAAA ATTTTTAAAG AGTGATCCCT TCGTAGCATT CATTGCCGGC AACGAAGAAC TCGTAGAAAC AAAACTGGTA GGGGATTATA ATTTCGATAA TATTCTTGCC GCCTTATGCA TCGGTAAATA TTTTGGCGTG CCTTCTATCG CAGCCAACCA GGCGATTGAA CAATACGATC CTACAAACAA CCGTTCTCAG ATTGTTAAGA CGGAAAAAAA TGAAGTGATC CTGGATTCAT ATAATGCAAA CCCAACGTCA ATGCGCGCCG CGATTGAAAA TTTTGCTTCC CTGCAAAAAG AAAACAAAGT AGTGATCTTA GGTGATATGT ACGAACTGGG TGAAGAAAGT GAAGTAGAGC ATGCTAATAT CGGCGCTTTA TTGAATTTGC TGACAGATAC AAAGATCATA TTGATCGGTA AAAATATGGC CGCTGCTTCA AAGGAATGTA CCGCTGCTGC ATATATGGAT ACAAAAGAAG CAGCAGTGAA TTTTCTGGTA TCCAATCAGA TTTTAAACAG TACAATTCTG TTGAAAGGCT CACGGGGAAT GGGTTTGGAG AGTTTGATGC CCTTGCTGTA A
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Protein sequence | MELAFLYESF LESRSVTTDT RKVKNGDLFF ALKGPNFNGN TFAATALEMG AAYVVVDEAE VVQDDRYVLV DDVLTTLQQL ANLHRRTLGI PILAITGSNG KTTTKELVNA VMSKKYKTYA TVGNLNNHIG IPLTLLAMDE SIEFGIVEMG ANHQKEIASY CSFVEPNYGL INNVGKAHLE GFGGFEGVKK GKGELYQYLF ETNGIAFINS KNEHLMEMSP FEAPVLYGRN SDFYNAKFLK SDPFVAFIAG NEELVETKLV GDYNFDNILA ALCIGKYFGV PSIAANQAIE QYDPTNNRSQ IVKTEKNEVI LDSYNANPTS MRAAIENFAS LQKENKVVIL GDMYELGEES EVEHANIGAL LNLLTDTKII LIGKNMAAAS KECTAAAYMD TKEAAVNFLV SNQILNSTIL LKGSRGMGLE SLMPLL
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