| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0694 |
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| Symbol | ybdL |
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| ID | 4186469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 792820 |
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| End bp | 794010 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638070700 |
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| Product | 2-keto-4-methylthiobutyrate aminotransferase |
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| Protein accession | YP_677321 |
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| Protein GI | 110637114 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.519768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGAAC AGTTGCTTTG TTCTTTTCTT AAAAAATCCA TGCAACAATC CTACACATCC
AAGCTGCCCG ATATAGGTGT TAATATTTTT TCAACCATGT CTGCGTTGGC ACAGCAATAC
AAAGCCGTTA ATTTAGCACA AGGTTTCCCC GATTTCGCCC CTTCAGAAGA ATTGATCCGG
CTGGTACATG ATTATATGCT GAAAGGCTTT AATCAATATG CACCGCTTGC AGGTGTGCGT
CCGTTGGTTG TAAACCTTGC TGAAAAAACC GAAAAACTTT ATGGTTTATC CTACGATCCG
GATACAGAAA TAACCATTAC CTGCGGTGCT ACAGAAGCGT GCTACACGGC TCTTACTTCC
ATTCTGCACG AGGATGATGA AGTAATTATT CCGGAACCTT GCTTTGATGT ATATCTGCCA
GCCATTCAAT TGAGTAAAGC AAAAGCAGTG TTTGTACCTT TGACGCTGCC TGATTTCAGT
TATGACTGGG AACTGATCCG TTCAAAAGTT ACACCGCGTA CCAAGCTCAT AATCATTAAT
TCGCCGCACA ACCCAACGGG CTCAATTCTT ACAGCAAAGG ATGTTGAGCA GTTGCAACTG
CTGGTGGAAG CATACCCCGG CTTGTATGTG CTGAGTGATG AAGTATATGA GCATATTGTT
TTTGATGGAA ATAAACATAT AAGTATTTCC GGGAATCCTG TTCTGAAAGA ACGGGCCTTT
ATAATCGGTT CCTTCGGGAA AACCTATCAC GTAACGGGCT GGCGACTGGG CTTCTGTCTT
GCACCTGCAT ACATGATGAA AGAATTTAAA AAGGTGCATC AGTATAACAC CTTTTCTCCG
GTTGCTCCCA TGCAGTTTGC TGTAGCAGAT TTTATGAAAA AAACAGATGA ATATGAATCG
TTGCCGGCAT TTTTTCAAAA CAAACGCGAC CTGTTTTTAC GGCATATTAA GGAAAGTAAA
TTTGACGTGA TTCCTGCCAG CGGAACATAT TTTCAAATGC TTTCCTATAA AAATATCAGC
GATGAAAACG ACCTGGATTT TGCTGCCCGT TTAACACGTG AATTTGGTTT GGCATCTATT
CCCGTTTCTG TTTTTTACAA CGATAAAACA GATCACAAAC TGCTTCGCTT TTGTATTGCG
AAGAAAGAAG AAACACTCCT TAAAGCTGCT CATATTTTAT GCAAGATCTA A
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| Protein sequence | MTEQLLCSFL KKSMQQSYTS KLPDIGVNIF STMSALAQQY KAVNLAQGFP DFAPSEELIR
LVHDYMLKGF NQYAPLAGVR PLVVNLAEKT EKLYGLSYDP DTEITITCGA TEACYTALTS
ILHEDDEVII PEPCFDVYLP AIQLSKAKAV FVPLTLPDFS YDWELIRSKV TPRTKLIIIN
SPHNPTGSIL TAKDVEQLQL LVEAYPGLYV LSDEVYEHIV FDGNKHISIS GNPVLKERAF
IIGSFGKTYH VTGWRLGFCL APAYMMKEFK KVHQYNTFSP VAPMQFAVAD FMKKTDEYES
LPAFFQNKRD LFLRHIKESK FDVIPASGTY FQMLSYKNIS DENDLDFAAR LTREFGLASI
PVSVFYNDKT DHKLLRFCIA KKEETLLKAA HILCKI
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