Gene CHU_0681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0681 
Symbol 
ID4184090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp780685 
End bp781182 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content45% 
IMG OID638070687 
Producthypothetical protein 
Protein accessionYP_677308 
Protein GI110637101 
COG category[S] Function unknown 
COG ID[COG2318] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.340859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA TTCCTGTCTT TTTAAAAGAA TTTGACGCTG AGGCGCAAAC CACCCGCAAC 
ATGTTGTCCC GCATTCCGGA TGACAAATAC GACTGGCAGC CGCATCCGAA GAGCATGACA
ATCCGGTCGC TTGCAACGCA TATTGCAGAA TTGTCAACCT GGGTAAGCCT TGCCTTAACA
ACAGACGAAC TTGATTTTGC TGCGGCACCC TACAATCCAA CGATTGTTAA TAATACAAAA
GAACTGCTGC GTTTATTTGA AAAAAGTCTT ATTGAGGGAA GAACGGAATT GATACCGGAG
AATGAAGCAA AACTTTCAGA AAACTGGACG CTTCGCAATG GAGACATCAT CTACAGTGTT
CAAACCAAAG CTGAAACCAT ACGTCATGCA TTCAGCCAGA TTATTCATCA TCGCGCACAG
TTGGGGGTGA ATCTACGATT GCTGAATGTA CCGATACCAG GCAGCTACGG ACCGAGTGCC
GACGAAAATG AATTATGA
 
Protein sequence
MELIPVFLKE FDAEAQTTRN MLSRIPDDKY DWQPHPKSMT IRSLATHIAE LSTWVSLALT 
TDELDFAAAP YNPTIVNNTK ELLRLFEKSL IEGRTELIPE NEAKLSENWT LRNGDIIYSV
QTKAETIRHA FSQIIHHRAQ LGVNLRLLNV PIPGSYGPSA DENEL