| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0660 |
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| Symbol | |
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| ID | 4185663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 757784 |
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| End bp | 759601 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638070666 |
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| Product | hypothetical protein |
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| Protein accession | YP_677287 |
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| Protein GI | 110637080 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01644] phage baseplate assembly protein V
[TIGR01646] Rhs element Vgr protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.279373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAG AACTTATTTT TGAAATTACT GTCAATGGAA ATTCGATTTA TCATTTTAAT
AAGCTCACCA TTCGGCAATC ATTTAATGCA CATCACACAT TTGAACTGAT TTTAGATCAG
GATACAATAG ATAGTCTCGG GTCATATGAT TTAAATGAAT CACAGGAATA CATAGGCACA
CCTATTAGTA TTTGTTTTGG AGAAAAAGAA GCCAGTGATG CTATTTTTAA AGGCATCATT
ACCGAAGTAG GGTTGAGCCA GCAACATGGT GCCTGGGGAA ATTTAATTTT TAAAGGCTTC
AGCCCAACCT ATCTGCTTGA GTCGGGAGCA CATTTTGCAT CCTATGAAAA AATGCCGTTA
AAAGATATAA TCCGTACTTC TATGGAAGCA ACTTCTTCTT ACAGCATAGA CGCCGGCATT
AATCCGGTGC ATAGTGAATC AATCCCGTAT ATGTGCCAAT ATGGAGAAAG CGGCTTTGCA
TTTTTAAACA GGCTAGCGGC TGAGTACGGC GAATGGTTTT TTTATGACGG CAGTACATTA
TTTTTTGGTA AACCGAAGGA ACAAAAAAAT GTTGAATTGG TATATGGGAG CAATATTTCG
GAAATGAATT TTTCGATGCG TGTTGTACCG GCAACCATTA ATCATTACAG TTATAAATCC
GACGAAGATG AAATATTAAC AGCGCAGTTA CCCTCAGATG TATCCGGTGC TACCAGCTAC
ATGCGCAAAG CTATTAGCGT TTCAAATGAT CTGTATGCAG TTCCGATCAA ACAGCCTGTT
TCAATTCGTG TTGCAGATCG ATATGGTATT GATACCTATG CTAAAACACA AAAAGCCAGA
CTTGCCGCAT CAACCATTTT GCTTACAGGT AAAAGTGATC AGCCCCGGAT TATACTCGGA
AATTATATCT CGGTAAAAGT GAGTAAAGAT TCCGGCACCG GGTATGATGA TCAGGGGGAA
TATGTTGTTA CTGCAATCAA TCATGAAATG ACGGGTACAG GTAGTTATAG CAACACATTT
CAAGCCATTC CTTCTGTAAA TGAAATTATT CCTTTTTCAG TAGCGAAACC TGTTGCGCAG
ACACAGATGG CACGTGTTAC AGATAACAAT GATCCGGATG CTATGGGACG TGTACGCGTA
CAGATGTTGT GGCAGCAGCA AACAGAACAG AAAACAGACT GGCTGCGTGT CATGACTCCC
GATGCAGGTG GAACAGAAGA AGTAAGTAAA AACCGCGGAC AGGTATTTGT TCCGGAAGTA
GGAGATCAGG TACTCATCGC ATTCAGGTAT AACGATCCAA ACAGGCCGTT TGTCTTAGGC
AGTCTTTTTC ATGGAGGCAC TGCCGCCGGC GGGCAAGCAG ATAACAGCAT CAAATCAATA
CAAACCCGCA GCGGTCACGT TCTTCAATTC AATGATACAA AAGATGGAGA AAGTATTACC
ATTAAAGATA AAAACGGCAA TACAATTTTT CTGGATACAG CAGGTAAAAA CATTACCATT
ACTGCGCCAG AAACGATGAC TTTTAATGCA AGGAATGTAG TAATGAAAGC AGAGGAGAAT
ATCACGATCA GCGCAGGTAA AGATATGAAG ACAGATGTAG GGGCGAACCA TACATTGAAT
ATTACTGAAA AGCATGAAAT AAATTCGAAC GAAACTACAG AAAACGTAAA TCAAGATAAA
CAAGCCCAAA TTGGTGGTGA TCTTGATTTG CGTACATCAT CAATAACAAT GGATGCAAGT
GGCGGGGATG TTTTAATTAA AAGCTCTGCC CTGGCAACGT TGCATGGAAA GTCGGATGCA
CTGTTAAATA AAGGATGA
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| Protein sequence | MSKELIFEIT VNGNSIYHFN KLTIRQSFNA HHTFELILDQ DTIDSLGSYD LNESQEYIGT
PISICFGEKE ASDAIFKGII TEVGLSQQHG AWGNLIFKGF SPTYLLESGA HFASYEKMPL
KDIIRTSMEA TSSYSIDAGI NPVHSESIPY MCQYGESGFA FLNRLAAEYG EWFFYDGSTL
FFGKPKEQKN VELVYGSNIS EMNFSMRVVP ATINHYSYKS DEDEILTAQL PSDVSGATSY
MRKAISVSND LYAVPIKQPV SIRVADRYGI DTYAKTQKAR LAASTILLTG KSDQPRIILG
NYISVKVSKD SGTGYDDQGE YVVTAINHEM TGTGSYSNTF QAIPSVNEII PFSVAKPVAQ
TQMARVTDNN DPDAMGRVRV QMLWQQQTEQ KTDWLRVMTP DAGGTEEVSK NRGQVFVPEV
GDQVLIAFRY NDPNRPFVLG SLFHGGTAAG GQADNSIKSI QTRSGHVLQF NDTKDGESIT
IKDKNGNTIF LDTAGKNITI TAPETMTFNA RNVVMKAEEN ITISAGKDMK TDVGANHTLN
ITEKHEINSN ETTENVNQDK QAQIGGDLDL RTSSITMDAS GGDVLIKSSA LATLHGKSDA
LLNKG
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