| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0549 |
|---|
| Symbol | |
|---|
| ID | 4186180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 636505 |
|---|
| End bp | 638133 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638070554 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_677176 |
|---|
| Protein GI | 110636969 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACAA ATCAGTATAC AGGAACTTCT TATTCAGAGG AGGCCGCAAC GCTGGAAGGA
GTAAGGCCTG CCGCTAAAAC CGCACATACA TCAGGTGAAT GGAGTTTATT TAAAAAAATC
TCATTTAGAA TTGCTTTCCC ATTCTTTCTG ATGATGTGCA TTCCGCTGAC AGGCGAATGG
TACAAACATC TTATCGGTAT TGACTGGACA AACCTGCATT ACCGGGATAT ATATGATATC
TGCAGATTCC CGACGTTTTC GTTTATTGAA GTAAGTCCGC AGGCCAGATG GGGGATTGGC
GGTTATGCAA ACTGGGGCGT AACCTTTTTA GTTGCAGTAG CAATTGGCCT GGTATGGACT
GTTGTGGATA AAAAAAGAAA AGAGTATGAT GTGCTGAATT ACTGGCTGCG TGTTATCATT
CGCTACCGTG CAGCACTTGG CATTATTGGT TTTGGTTTTA CAAAATTGCT GCCTGTTCAG
ATGCCGTATC CATCACAGGC ATTATTAAAC GGAGACTTTG GTGATTTTAC CGAACAGAAA
ATTTATTGGA TGTCGATCGG TATTGTACCG TGGTACCAGA TTTTTACCGG GATTGTTGAA
GTGGGTGCAG GTACGTTATT GTTGTTCCGG AAAACTACTT CGTGGGGTGC AGCATTGCTT
GTCGGTACAT TAGGTACCAT TGTAGTGGTA AACCTCGCGT ATGATGGCGG TGTACATGTA
TACTCGTCCT TCTTTGTATT ACTGGGTGTA TACCTGTTGA TTACCGATGT TAAAAATGCC
GTTGATCTGC TGGTATTTGA AAAATTTGTT GTTCCCGTGA AACGTTACTA CCCTTTATTT
ACAGAAGGCT GGCAGAAATA CGGACGCATT TTTGTAAAAT CTGCAATCGT ATTCATTTTC
ATATTTGTAT TCTTTTATTA TCAGTTATTA AACTTTCTGT ATGATCCTTA TAAACAGCCA
TCTTTAAAAG GTGTAAAAGA ATTAAGAGGA AATTATACCG TAACGGAATT CAGACTGAAC
AATAAAATAA TTCCATATTC TCCCTTTGAT ACACAACGCT GGCAGGAGGC TACATTTGAA
AAATGGACAA CGCTAACATA TAAAGTCAAT AAACCTGTAC AGATAGATTT GTCAAACGGA
GGCGGCGATC CGATGAAAGA TATCAGCCGT ACATTTGAAG TGTCTGGTGT TGGTGGCGGG
AGAAGAACGT TTTATTACGA TGCAGATACT AAAAATCACA TGTTGTATCT GCAGGATAAA
AACATTCCAA CCCTTCCGAG GAATGTAGGA CCTGGTGGGA TCGCAGACCG TAAAAAGCGC
GAATCTGCTA AAGACAGCAT TTATCCTGAA AACTGGATCT CTACGGCATC ACTTGCAAAC
ATTGGGGACA ATGCATTAAA ATTAAATCCC AAAGTAGTGA ATACCCGTCG TATTGAAGCG
TATAAAACTG AAAAGGAAAT CAAAACCAGA AAGAAAATGG TTTTGAATTA CACGGTATTG
AATGATGGTG CCCGGGTAAT TTTAACAGGC ACAGATGAGA ACAGAGATTC TATTTATGTA
GTGCTTGATA AAGTAAAGAG AGATTACATC GTTTCTGAAA GTTCATTGAA AGCGGGCGTA
TATGAATAG
|
|---|
| Protein sequence | MSTNQYTGTS YSEEAATLEG VRPAAKTAHT SGEWSLFKKI SFRIAFPFFL MMCIPLTGEW
YKHLIGIDWT NLHYRDIYDI CRFPTFSFIE VSPQARWGIG GYANWGVTFL VAVAIGLVWT
VVDKKRKEYD VLNYWLRVII RYRAALGIIG FGFTKLLPVQ MPYPSQALLN GDFGDFTEQK
IYWMSIGIVP WYQIFTGIVE VGAGTLLLFR KTTSWGAALL VGTLGTIVVV NLAYDGGVHV
YSSFFVLLGV YLLITDVKNA VDLLVFEKFV VPVKRYYPLF TEGWQKYGRI FVKSAIVFIF
IFVFFYYQLL NFLYDPYKQP SLKGVKELRG NYTVTEFRLN NKIIPYSPFD TQRWQEATFE
KWTTLTYKVN KPVQIDLSNG GGDPMKDISR TFEVSGVGGG RRTFYYDADT KNHMLYLQDK
NIPTLPRNVG PGGIADRKKR ESAKDSIYPE NWISTASLAN IGDNALKLNP KVVNTRRIEA
YKTEKEIKTR KKMVLNYTVL NDGARVILTG TDENRDSIYV VLDKVKRDYI VSESSLKAGV
YE
|
|---|
| |