| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0521 |
|---|
| Symbol | |
|---|
| ID | 4185151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 598332 |
|---|
| End bp | 600503 |
|---|
| Gene Length | 2172 bp |
|---|
| Protein Length | 723 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638070526 |
|---|
| Product | heme utilization protein |
|---|
| Protein accession | YP_677148 |
|---|
| Protein GI | 110636941 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.160365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0276077 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAACTT TTAATTTACA AACAATGAAA AAATATATTA ATACAAAGAT CAGTACAATG
CTTTATTGTG TTCTTTTTGT ACTAGGCACA CCGGTTGCAA GTCACGCACA TTTTGGTTCA
AAAGGACCAT TTGGCGGAAG CATTACGTGT ACGGTGGTAG CAGGGGATAC GGTTTATATG
GGTACTGAAG AAGGTGGTGT ATTCGAAAGT ACAAGTGCAT TATTGGTGGG ATGGCGCGCA
AGGCCGGTTG GGTTAAAGAG CGGAAAAATA ACAGCTATTG CACACACGGG TGTAAACCTG
TTTGCAGCAA CAGCAGACAG CGGCATTTTC GTTTTAAATG GCTATGTAGG TTCCGACCGT
TATTGGAACA AAGTAAATAC CGGGTTAACA AATTTACATG TTACCAGCCT GATCGCGATC
AGCAAAACGA CACTGCTGGC AGGAACCACT AATGGATTAT TTCTGACAAC CAACAGCGGT
GCAAGCTGGC AGGCCGTTAA CGGAGATCTG CATCATCTGG ATATTACAAG GATTGTAAAA
GCAGGTGCTA GAATTTTTGT AACAGCTCAG GATGGCGGTG TGTATGCAAC AGATAATACG
GGTGCTTCAT GGATTGAATT TAATGATGTA CATACAGAAC ACATTGCCGG TACTACAGCA
TTATCGTACA ATGCAGCAAC GGATGCTTTA ATGGTTCTGA ATGAAAACGG ATTATTTATT
GCGCAAACAG TAAGCACAAC CAATACACCT GTTTATACAG CTGCTGCCGG ATTTCCTTCA
AATGAAACAG TTGCGTATAT TTCAAACAAT GGTGCAAACT GGTATATAGC TACCAATAAA
GGAGTATATA CGTCTTCCGC TTCGGTTATT AACTGGACAA GCATATCAAC AGGTTTAGCA
GGTCTTCCGG TGAAAACAGT TGAACCTTTT AAAAATGGTC TTGTCAGCGG TACAAGGCTG
TATGGTATTT ATAAAACAAA TTTACCTGTT GTTTCCTGGT CTGGGATGAA TATAAATTTT
AATAATTTGA AAACAACCGC CATGGTTACA AGCGGCACAG GCTTTATTGT AGCAGCAACA
GAACTGGGCG TACGTGTAAG CAGAGATATT GCAGCCAGTT ATGTTTCCGC AAATCTTGGT
CTGGAAGACA GTACACATGT TAATGATCTG GTTATTGCGA AACACTTTTT GGTAGCGGCA
ACAACATACT CAGGTGTATT TATTACTGCA GATTCCGGTA AGCACTGGAC AGCGATCAAT
ACCGGCCTGG AGAATCCAAA CATTAAAAAA GTGTTTTATT CAAATGATAT ATTATATATT
ATTGATGCTG CCGGTAATGT TTTCAGAGCG TCTGTAGGTC TGCCTCAATG GACTCCCATA
CAGAGCGGAT TGCCTTCGGA TGTTAAGCCA ACGTCAATGG CATTTTACGG AAATAATATT
CTGTTAAGCA CACAAGGTAG TGGTGTGTTT ATAAAAACAG AAACAGGTAC GTCATGGACA
GCATACAATA CCGGTTTATC AAACCTGAAT GTAACTTCTG TTACAGCTTT AGGTACTAAA
ATATATGCAG GTACAGATGG TTCAGGTGTA TTCGTTTCAG ATTCCGCAAA GGCTCAGATC
AGCTGGTCGG CAACGGCACC TACCATCATT TCCCATACAA CTTTATTAAA TCTGAATGGT
ATGCAGATTC AGGCATTGGC AAGCTATGCA GGTCATATAT GGGCCAGCTG CAAAGGCGGC
TTGCTGGTAA GTCCCGATAA CGGAGCTACG TGGAATGAAG GCGGAAACCA GTTTAACTTA
CCAAGCTTTA CAGATGTTAC AAAAATTAAT TTTGTTAAAA CACGTGTGTT TGTTTCAACG
GAAAATAATG GTTTATACTC AAATGCCCTG TCTGAGATAA CAACCATTAC CTCGTTATTC
AGCAGTACTC CGGTAAATTA TACAGCATTA TTGATAGCTC CGAATCCTGC ATCCGGAGCA
TTTAAGCTGG ATACAAAAAA TGTAAGCGGA AGCGTGAAAG AAATCATCAT CTATGATTAC
AATGGCCATG TGAAAGACCG GTTTGTTCAG GAACAGGACG TGTATTCTAT ACACTATACA
CCCGGCATGT ATCTGGTGCA GGTAACAACT TCTGAAGGTA CGCTGTATAC ACAAAAGATG
GTTGTTAAAT AA
|
|---|
| Protein sequence | MLTFNLQTMK KYINTKISTM LYCVLFVLGT PVASHAHFGS KGPFGGSITC TVVAGDTVYM
GTEEGGVFES TSALLVGWRA RPVGLKSGKI TAIAHTGVNL FAATADSGIF VLNGYVGSDR
YWNKVNTGLT NLHVTSLIAI SKTTLLAGTT NGLFLTTNSG ASWQAVNGDL HHLDITRIVK
AGARIFVTAQ DGGVYATDNT GASWIEFNDV HTEHIAGTTA LSYNAATDAL MVLNENGLFI
AQTVSTTNTP VYTAAAGFPS NETVAYISNN GANWYIATNK GVYTSSASVI NWTSISTGLA
GLPVKTVEPF KNGLVSGTRL YGIYKTNLPV VSWSGMNINF NNLKTTAMVT SGTGFIVAAT
ELGVRVSRDI AASYVSANLG LEDSTHVNDL VIAKHFLVAA TTYSGVFITA DSGKHWTAIN
TGLENPNIKK VFYSNDILYI IDAAGNVFRA SVGLPQWTPI QSGLPSDVKP TSMAFYGNNI
LLSTQGSGVF IKTETGTSWT AYNTGLSNLN VTSVTALGTK IYAGTDGSGV FVSDSAKAQI
SWSATAPTII SHTTLLNLNG MQIQALASYA GHIWASCKGG LLVSPDNGAT WNEGGNQFNL
PSFTDVTKIN FVKTRVFVST ENNGLYSNAL SEITTITSLF SSTPVNYTAL LIAPNPASGA
FKLDTKNVSG SVKEIIIYDY NGHVKDRFVQ EQDVYSIHYT PGMYLVQVTT SEGTLYTQKM
VVK
|
|---|
| |