Gene CHU_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0488 
SymbolpyrR 
ID4185473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp569336 
End bp569839 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content40% 
IMG OID638070495 
Producturacil phosphoribosyltransferase/pyrimidine operon attenuation protein 
Protein accessionYP_677117 
Protein GI110636910 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGA AGAATCTTAT TTTAACGAAG AAACAAATTC AGCAGCGCAT CAAACGTATT 
GCATACGAAA TTCTGGAACA GAACTTTAAA GAAAAAGAAA TCGTTTTTGC CGGTATTTAT
GATCGTGGTT ATTCTGTAGC CAAGTTGCTG GAAAAAGAAT TTAAGTCTAT TTCTTCTACA
CAAACCGTGC TGATCAAAGT AACGCTGGAT AAGCAGGCTC CTTCTCAAAG TGAAGTGACG
CTGGATGTGG ATGTTAAGAC ATTAAAAAAC AAATGCATCA TTATCGTAGA TGATGTATTA
AGCACAGGCC GTACGATTGC CTACAGCTTA AAACCTTTTT TAAATATCCG GGTGAAGCGT
ATTCAGACGG CTTTCATTGT AGACCGTGGC CACCACACCT TCCCGATCTC CGCTGATTTT
GTGGGCTATG TAATGGCTAC TACCCTGAAT GAACACGTTG AGGTTAATCT TTCTTCGAAG
GAAATGGGTG TGTATCTGAG TTAA
 
Protein sequence
MAEKNLILTK KQIQQRIKRI AYEILEQNFK EKEIVFAGIY DRGYSVAKLL EKEFKSISST 
QTVLIKVTLD KQAPSQSEVT LDVDVKTLKN KCIIIVDDVL STGRTIAYSL KPFLNIRVKR
IQTAFIVDRG HHTFPISADF VGYVMATTLN EHVEVNLSSK EMGVYLS