Gene CHU_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0481 
Symbol 
ID4185466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp562088 
End bp562939 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content36% 
IMG OID638070488 
Producthypothetical protein 
Protein accessionYP_677110 
Protein GI110636903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.718036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.644199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TTTTACTTAC AGTAACTCTT GCAGCAACGT CTTTATTTTC TTTTGCACAA 
ACCCCTGCAG TTCCAAATGG TGGTTTTGAA ACCTGGACAA CAAGTCCTTG CGGTGAAAAA
CCCGACGACT ATTTTACAGC TGCTGAATTA TACAATTCCT TTTTTAATAG TTGCCCTAGC
GATGCCGGTG TAACGAAATC CACGGACAAA TATTCTGGTA CCTATGCGTT AAAACTGACC
GCATTCGGAT TTCAAGGTTC CTCTTCAAAT TCAATATATT TATCTTCATC TGTTGATGAT
TATGGTGTTA GTTTTAATGG TCGCCCGACA AAACTGGTTG GTTATACAAA ATTTACTAAA
GGTGGTACCG ATGTACTAAA CATTGGTGTA GAATTAGACG ATGCTAATGG TAATGAAGTG
GCATATAATG AAGTAAATAT TTCAACGACA CAATCCGGAT ATACAAAATT CGAAATCACG
TTGGAGTATG GTACATCAAA TACTAATGAT GTATCTTCAT TAATTATTTT TATCAACCTT
GGAAATGCCT CTGATAAAGC TTCTGCCAGC AGTATTGCTT TGATTGATGC GTTATCTTTT
GAATATGGAA CAGCAACTTC TACCGTTAAC TATTCTTCAA AGTCTCCAAT CAACGTTTTT
GCTGCAAACA ATAGCATCAA CTTCTCTGAA AATGTTTCTG ACGTTCATGT TACAGATATG
CTTGGTGCAA GCAAAATACA GGAAGCTGCA AGCACAAAAA CAATGAACAC GGCTTCTTTA
ATAAGCGGTT TATACATTGT GACGTACAAC TACAACGGCA ACTACTTCAG CAAAAAAGTA
GTAATTGAAT AA
 
Protein sequence
MKKILLTVTL AATSLFSFAQ TPAVPNGGFE TWTTSPCGEK PDDYFTAAEL YNSFFNSCPS 
DAGVTKSTDK YSGTYALKLT AFGFQGSSSN SIYLSSSVDD YGVSFNGRPT KLVGYTKFTK
GGTDVLNIGV ELDDANGNEV AYNEVNISTT QSGYTKFEIT LEYGTSNTND VSSLIIFINL
GNASDKASAS SIALIDALSF EYGTATSTVN YSSKSPINVF AANNSINFSE NVSDVHVTDM
LGASKIQEAA STKTMNTASL ISGLYIVTYN YNGNYFSKKV VIE