Gene CHU_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0480 
Symbol 
ID4185465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp561208 
End bp562044 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content38% 
IMG OID638070487 
Producthypothetical protein 
Protein accessionYP_677109 
Protein GI110636902 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0806354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.624164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TTTTACTTAC ATCAGCTCTT GTAGCAACTT CTTTATTTTC TTTTGCACAA 
ACACCTGCGG TCCCAAATGG TGGTTTTGAA AACTGGTCCG AAGCACTTTG TGATGGCGAA
ACACCAGATG AGTATGTAAC TACTGCCGAC ATGTTTTTTG AAGATAATGG AGTATGCCCA
ACAACTACAG GCATTTCTAA ATCAACCACT AAGTATTCAG GCACATATGC ATTGCAATTA
ACTTCAGCAA CCCAAAGCGG TATAAATATT GGGAACAGTG TTTTCTTATC ATCTGATTTT
ACTGGCCGTC CTACAAAGCT TGTTGGCTAT ACAAAATTCA CTAAAGGCGG AACGGATACG
TTAGGCATCA TGGTGGCTGT TGGAGATATT GAAAATGAAA ATCCAGTAGC TTATGGAGAA
TTAACTCTTT CTGCAACACA AGGTGCTTAT ACTAAATTTG AGATCACACT GGAATACGAT
GCTGAAAATA CTTCAGACGT GAATACATTA GTCCTGGTTA TTGGAACAGG TGCGAAAACA
GGCTTTGCAT CATCCTCTAC CGTTGCATTA ATTGATGCAT TGTCATTCGA ATACAGTCCA
ACATCAACAG TTAACTACGC TGCAAAATCT CCAATCAACG TTTTTGCTGC AAACAACACA
ATCAACTTCT CTGAAAATGT TTCTGATGTA CATGTTGTTG ATATGGTTGG CGCCAGCAAA
ATACAGGAGG CTTCAAGTAC AAAAACAATG AATACGTCTT CTTTAACAAG TGGTCTATAC
ATTGTGACGT ACAACTACAA CGGCAACTAC TTCAGCAAAA AAGTAGTGAT CGAGTAA
 
Protein sequence
MKKILLTSAL VATSLFSFAQ TPAVPNGGFE NWSEALCDGE TPDEYVTTAD MFFEDNGVCP 
TTTGISKSTT KYSGTYALQL TSATQSGINI GNSVFLSSDF TGRPTKLVGY TKFTKGGTDT
LGIMVAVGDI ENENPVAYGE LTLSATQGAY TKFEITLEYD AENTSDVNTL VLVIGTGAKT
GFASSSTVAL IDALSFEYSP TSTVNYAAKS PINVFAANNT INFSENVSDV HVVDMVGASK
IQEASSTKTM NTSSLTSGLY IVTYNYNGNY FSKKVVIE