Gene CHU_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0479 
Symbol 
ID4185464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp560315 
End bp561151 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content38% 
IMG OID638070486 
Producthypothetical protein 
Protein accessionYP_677108 
Protein GI110636901 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0185776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TTTTACTTTC AGCAGCTCTT GCAGCAACGT CTTTATTGTC TTTTGCACAA 
ACACCTGCAG TTCCAAATGG TGGCTTTGAA AACTGGGAAG ATGCTTCTTG TGAGGGTACT
GAAATACCAT CTGGCTACAT AAGCGCTGCA GATTTATTTA ACGAAGAAAA CGGTTTTTGT
CCTTCATCTA CCGGAATCAC TAAAGCAACC AATAAATATT CCGGCACGTA CGCATTACAA
CTTAAACCTC AGGTGTTTTT AGGAGCATCA CTTGGAAATG GTGTTTTTTT ACAATCTGAT
TTCACAGGAC GCCCTACAAA ACTTGTTGGA TATACAATGT TCACAAAAGG CGGAACGGAT
ACCTTAGGTA TCTTTGTAGG CATTGGCGAT GAAAATGATG ATGAAGTTGC GTATGGTGAA
GTTACCTTAT CCGCATCACA AGGTGATTAC ACAAAATTTG AAATCACCTT GGATTATACA
GACAATACGT CAGAACCAAC GTACGTAGTA ATTGGTTTTA CAATAGGAAA TACAACAAAT
GGGTATGCAA CAGCTAGTAC AACTGCTTTG ATTGATGCAT TGTCATTCGA ATATACTGCA
ACATCAGCAG TTAACTACGC TGCAAAATCT CCAATCAACG TTTTTGCTGC AAACAATGTA
ATCAACTTCT CTGAAAATGT TTCTGATGTA CATGTTGTTG ATATGCTTGG TGCAAACAAA
ATACAGGAAG CTGCGAGTAC AAAAACGGTA AGCGCTAACT CACTAAACAG CGGTTTATAT
ATTGTTACAT ACAACTACAA TGGCAACTAC TTCAGCAAAA AAGTAGTAAT CGAGTAA
 
Protein sequence
MKKILLSAAL AATSLLSFAQ TPAVPNGGFE NWEDASCEGT EIPSGYISAA DLFNEENGFC 
PSSTGITKAT NKYSGTYALQ LKPQVFLGAS LGNGVFLQSD FTGRPTKLVG YTMFTKGGTD
TLGIFVGIGD ENDDEVAYGE VTLSASQGDY TKFEITLDYT DNTSEPTYVV IGFTIGNTTN
GYATASTTAL IDALSFEYTA TSAVNYAAKS PINVFAANNV INFSENVSDV HVVDMLGANK
IQEAASTKTV SANSLNSGLY IVTYNYNGNY FSKKVVIE