Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0478 |
Symbol | |
ID | 4185463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 559318 |
End bp | 560226 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070485 |
Product | hypothetical protein |
Protein accession | YP_677107 |
Protein GI | 110636900 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.144304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TTATATGTTA TCTTTCTCTG TCAGCACTTT CATTAAGCTC TTTTTCTCAA ACTCAGATTG CAAACGGTGA TTTTGAAAAC TGGTCATCTT CGGAATATTG TTCAGCACTG GATTCATTGG ACAATTTCTT AACTGGGCAG GCTTTTTTTT ATCTGAACGC AAAAAATGAA ACAGATGCTA TTGAGTGTCC GGCATTACCG TTTACGTACA AAACAACAGA TAAGCAATCG GGCAGCTACG CACTGAAACT TGGTCCTCAA TACTTTGATG ATAAAGCCTA TTACAATTTT GTAACGCTTG GGGAAGCAGC GTATTTTGAA GAAGAAGGAT CGGTTGCTTC ATTCGGTATT CCTTTTACCG GCCGTCCTTC AAAACTAACG GGTTACTATA AATGCACAGC GGGTGCGGTT GGTGATGAAT TGCAGATTAA GGTATTCGGT TCAAATTTCA CCTCAGAAGA TCCTTTATTT TACGGGGTAT TCACTGCTTC CGAAAATCAA CCGATGTATG AAAAATTTGA GATTGACTTA GTCTACGATC CGACAGACCC GAATAATGCC GTGTATTTAA GTATGTTAAT TACAGTAGGT AATTTAAATG ACGGATCAAT TGATGAAAAC ACCGTAGCAT TTATTGACAA TCTTGTATTT GAATATGATG CTACTGCTGC GACAAGTTAC ACACCAGTGT CTCCCATCCA TGTGTTTGCT TCAAATAAAA CCATCAGCTT CTCTGAACAT GTATCTGATA TACATGTAGT GGATATGGTT GGTGCGAACA ACATTCAGGA AGCTGCAAGC ACAAAAACAC TGCATGCAGA AACGCTTAAC AGCGGATTAT ATATTGTTAC CTACAACTAC AAGGGCAACT ACTTCAGTAA AAAAGTGGTG ATCGAATAA
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Protein sequence | MKKIICYLSL SALSLSSFSQ TQIANGDFEN WSSSEYCSAL DSLDNFLTGQ AFFYLNAKNE TDAIECPALP FTYKTTDKQS GSYALKLGPQ YFDDKAYYNF VTLGEAAYFE EEGSVASFGI PFTGRPSKLT GYYKCTAGAV GDELQIKVFG SNFTSEDPLF YGVFTASENQ PMYEKFEIDL VYDPTDPNNA VYLSMLITVG NLNDGSIDEN TVAFIDNLVF EYDATAATSY TPVSPIHVFA SNKTISFSEH VSDIHVVDMV GANNIQEAAS TKTLHAETLN SGLYIVTYNY KGNYFSKKVV IE
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