Gene CHU_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0478 
Symbol 
ID4185463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp559318 
End bp560226 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content38% 
IMG OID638070485 
Producthypothetical protein 
Protein accessionYP_677107 
Protein GI110636900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.144304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TTATATGTTA TCTTTCTCTG TCAGCACTTT CATTAAGCTC TTTTTCTCAA 
ACTCAGATTG CAAACGGTGA TTTTGAAAAC TGGTCATCTT CGGAATATTG TTCAGCACTG
GATTCATTGG ACAATTTCTT AACTGGGCAG GCTTTTTTTT ATCTGAACGC AAAAAATGAA
ACAGATGCTA TTGAGTGTCC GGCATTACCG TTTACGTACA AAACAACAGA TAAGCAATCG
GGCAGCTACG CACTGAAACT TGGTCCTCAA TACTTTGATG ATAAAGCCTA TTACAATTTT
GTAACGCTTG GGGAAGCAGC GTATTTTGAA GAAGAAGGAT CGGTTGCTTC ATTCGGTATT
CCTTTTACCG GCCGTCCTTC AAAACTAACG GGTTACTATA AATGCACAGC GGGTGCGGTT
GGTGATGAAT TGCAGATTAA GGTATTCGGT TCAAATTTCA CCTCAGAAGA TCCTTTATTT
TACGGGGTAT TCACTGCTTC CGAAAATCAA CCGATGTATG AAAAATTTGA GATTGACTTA
GTCTACGATC CGACAGACCC GAATAATGCC GTGTATTTAA GTATGTTAAT TACAGTAGGT
AATTTAAATG ACGGATCAAT TGATGAAAAC ACCGTAGCAT TTATTGACAA TCTTGTATTT
GAATATGATG CTACTGCTGC GACAAGTTAC ACACCAGTGT CTCCCATCCA TGTGTTTGCT
TCAAATAAAA CCATCAGCTT CTCTGAACAT GTATCTGATA TACATGTAGT GGATATGGTT
GGTGCGAACA ACATTCAGGA AGCTGCAAGC ACAAAAACAC TGCATGCAGA AACGCTTAAC
AGCGGATTAT ATATTGTTAC CTACAACTAC AAGGGCAACT ACTTCAGTAA AAAAGTGGTG
ATCGAATAA
 
Protein sequence
MKKIICYLSL SALSLSSFSQ TQIANGDFEN WSSSEYCSAL DSLDNFLTGQ AFFYLNAKNE 
TDAIECPALP FTYKTTDKQS GSYALKLGPQ YFDDKAYYNF VTLGEAAYFE EEGSVASFGI
PFTGRPSKLT GYYKCTAGAV GDELQIKVFG SNFTSEDPLF YGVFTASENQ PMYEKFEIDL
VYDPTDPNNA VYLSMLITVG NLNDGSIDEN TVAFIDNLVF EYDATAATSY TPVSPIHVFA
SNKTISFSEH VSDIHVVDMV GANNIQEAAS TKTLHAETLN SGLYIVTYNY KGNYFSKKVV
IE