Gene CHU_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0465 
Symbol 
ID4185990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp548027 
End bp548368 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content43% 
IMG OID638070473 
Producthypothetical protein 
Protein accessionYP_677095 
Protein GI110636508 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCATA TACAGAAGGG AATAGCCGGC GAGCAGAAGG CGTGTGCTTT CCTGGAACAG 
CAAGGATACA AAATCATTGA AAAAAATCTG CGGATCGGTA AAGGTGAAAT CGATCTGATC
GCCGTGCACA ACAATTGCAT GTGCTTTATA GAGGTTAAAT ACCGCAAGCA TAACCGCTAC
GGGTTTCCGG AAGAGTTTGT AACACAAAAA AAATTATTGA AGATCCAGGA AACAGCGGAA
GCCTATATTT ACACGGTAAA CTGGCAAGGG AGAATACGCT TTGATGTTGT TGCCATAACC
GGAGAAGAGC TGCCGGTACA TTTAATGGAT GTAACACTTT AA
 
Protein sequence
MEHIQKGIAG EQKACAFLEQ QGYKIIEKNL RIGKGEIDLI AVHNNCMCFI EVKYRKHNRY 
GFPEEFVTQK KLLKIQETAE AYIYTVNWQG RIRFDVVAIT GEELPVHLMD VTL