Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0447 |
Symbol | |
ID | 4186615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 524694 |
End bp | 525503 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070454 |
Product | hydrolase |
Protein accession | YP_677076 |
Protein GI | 110636869 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGTCT TGAAACGAAA CAATGTAACC ATCTTAGGTG AAGGAGAGAA AGTACTATTG TTTGCTCACG GATTTGGATG CGATCAGAAC GCCTGGAAAT ACATCCAGAA TTTTTTCACC GAAAATTACA AGCTTGTTTT ACTTGATTTT GTTGGAGCAG GAAAATCTGA TTTATCATCC TATGATCCCG AAAAATACGC CTCATTAGAT GGCTATGTAA CCGATATCAT GGAAATATGT GATGCATTAA AATTAAGCAA CGCAATATTT ATCGGACATT CCGTTAGCTG TATGATCGGA GCTTTAGCTT CAATAAAAAG ACCTGATATT TTTGAAAAAC TTGTTTTCAT AGGTCCATCT CCATGTTATA TAAGTATAGG AGATTACATA GGAGGATTTG ACAAAGAAAC AATTGACGCA CTATTCGAGG TTATGGAAGA AGATTATATC AGCTGGGCCA GATCAATTGC ACCATCCATC ATGGATTCAA AAAATGGGAA TGAACGTACA CGTGAATTAT CAGATAGTTT TTGCTCGATT GATCCCATTA TAGCAAAGCA ATTTGCAAGG GTTACTTTTT TGTCCGATAA TAGAAAAGAC CTTCCCTTAA TTCCTGTTGA AAGCCTGACC ATACAATGTT CAGACGATAT GATCGCGCCA TTGGCTGTGG GGGAATACAT CCATGCAAAT ACCCCTGATA ATACATTAGT GGTATTGGAA GCATATGGGC ATTGTCCTCA TATGAGCCAT CCAACGGAAA CCGCTAAGGC TATTATGCGT TTTTGCAGTA AGCCCGTACA AGTTGTTTAA
|
Protein sequence | MNVLKRNNVT ILGEGEKVLL FAHGFGCDQN AWKYIQNFFT ENYKLVLLDF VGAGKSDLSS YDPEKYASLD GYVTDIMEIC DALKLSNAIF IGHSVSCMIG ALASIKRPDI FEKLVFIGPS PCYISIGDYI GGFDKETIDA LFEVMEEDYI SWARSIAPSI MDSKNGNERT RELSDSFCSI DPIIAKQFAR VTFLSDNRKD LPLIPVESLT IQCSDDMIAP LAVGEYIHAN TPDNTLVVLE AYGHCPHMSH PTETAKAIMR FCSKPVQVV
|
| |