Gene CHU_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0333 
SymbolhemA 
ID4185515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp399099 
End bp400376 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content41% 
IMG OID638070341 
Productglutamyl-tRNA reductase 
Protein accessionYP_676963 
Protein GI110636756 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCGA ATTTCAAATC CATCAGTTTA ACATATAGAA AAGCACCGCT TGAAATCCGT 
GAGCGTGTTG CATTAAACGA AGCAGAATGT AAAAGTTTGA TGTTACGAAT CAAAGATTTT
ACAGATACTG CTGAATTACT GATCCTTTCT ACGTGCAACC GCACCGAAAT ATACTATACT
TCCAACGAAG ATTACAGCAA CGATATTATT AAGTTGCTTG GTGTTGAAAA AAACATCACC
GGACTGATTC AGCAAAAAGA ATATTTTGAA ATATACAACG AACAGGCAGA TGCTGTACTG
CATTTGTTTG AAGTAGGCAT TGGTCTTGAC TCACAGGTAG TAGGTGATAT GCAGATCGTA
AACCAGGTGA AATATGCATA CCAATGGAGT GCAGATCTGA ACCTTGCCGG TCCGTTTTTG
CACCGATTGA TGCACACGAT CTTCTTCACC AATAAACGTG TGGTTCAGGA AACAGCGTTC
CGCGACGGAG CTGCATCTGT ATCGTACGCT ACTGTTGAGC TTTCAGAAGA ATTGCTGAGT
GCCACACCGA ATGCAAACAT TTTAATTGTT GGCCTTGGTG AAATCGGTGC CGATGTATGC
CGTAACTTCA AGGCAAATAC GTCTTTCAAA AATATTACCT TAACAAACCG CTCTCCGCTT
AAATCAGAAG CCCTGGCTGC TGAATGCGGC ATTGAACACG TTCCTTTTGA AACACTTTGG
GAAGCCGTTG CCAAAGCTGA TCTGGTGATC AGTTCGGTTG CAAAAGAAGA GCCTTTATTC
ACAAAAGAAG AGATACAGAA ATTATCGATT CTTTCTCATA AATACTTTAT TGACCTGTCT
GTTCCGAGAA GTGTAGACGC ACGCGCGGAA GAATTGCCGG GTATTATTGT GTACGACATC
GATCATATCC AGAACCGTTC AAACGAAGCG CTGGAGAACC GATTGAATGC GATTCCGCAT
GTTCGCAAGA TTATTCTTGA TTCTATTGTT GAATTCAATG AGTGGTCTAA AGAGATGGAA
GTTTCTCCAA CAATCAACAA ACTGAAAAAT GCCCTGGAGC AGATCCGCAA AGAAGAATTA
TCGCGCTTTG TGAAACAGTT AAGTGATGAA GAAGCTAAAA AGGTAGATGA AATCACGAAG
AGCATCATGC AAAAAATTAT TAAGCTTCCT GTACTGCAAT TAAAAGCTGC CTGCAAACGG
GGCGAAGCTG AAACATTGAT TGATGTATTG AATGACCTGT TTAATCTGGA TAAACAACCG
GAACAAATTC GTGATTAA
 
Protein sequence
MISNFKSISL TYRKAPLEIR ERVALNEAEC KSLMLRIKDF TDTAELLILS TCNRTEIYYT 
SNEDYSNDII KLLGVEKNIT GLIQQKEYFE IYNEQADAVL HLFEVGIGLD SQVVGDMQIV
NQVKYAYQWS ADLNLAGPFL HRLMHTIFFT NKRVVQETAF RDGAASVSYA TVELSEELLS
ATPNANILIV GLGEIGADVC RNFKANTSFK NITLTNRSPL KSEALAAECG IEHVPFETLW
EAVAKADLVI SSVAKEEPLF TKEEIQKLSI LSHKYFIDLS VPRSVDARAE ELPGIIVYDI
DHIQNRSNEA LENRLNAIPH VRKIILDSIV EFNEWSKEME VSPTINKLKN ALEQIRKEEL
SRFVKQLSDE EAKKVDEITK SIMQKIIKLP VLQLKAACKR GEAETLIDVL NDLFNLDKQP
EQIRD