| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0323 |
|---|
| Symbol | |
|---|
| ID | 4185505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 389556 |
|---|
| End bp | 390458 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638070331 |
|---|
| Product | deacetylase |
|---|
| Protein accession | YP_676953 |
|---|
| Protein GI | 110636746 |
|---|
| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCAAA TCGCCTACCA TCCTGTCTAC AATCATCCGG TTCCGGAGGG GCATCGTTTT
CCGATGCTGA AATATGACCT GATTGCAGAG CAATTAGTAT ATGAAGGCAC GATAACCGAA
TCCAATTTAA CTACACCTGT ACGCATTGCA TCCGAGGATC TCCTGCGTTC ACAGGATGCA
ACATATGTAC ATAAGCTGAA TACCTTAAGT CTTTCGCCAT CGGAAATCCG CAAGACCGGC
TTTGAACTTA CAGCTGAGCT GGTGTACCGG GAAGAGGTAA TTATGCAGGG CACAATTGAT
TCAGCGTTAC ACGCCTTGAA ACACGGTATC GGAATGAATA TTGCCGGCGG CACACATCAC
GCCTATAAAG AACATGGCGA AGGCTTTTGT TTGTATAACG ACATCATACT TGCCGCAGAT
TACCTGCTGG CAAACAAATT AGCGCATCAG GTTCTGGTAG TAGATCTGGA TGTACATCAG
GGAAATGGTA CCGCTAAAAT GGCTGAAGGA AATACACAGA TTTTTACGTT TAGTATGCAT
GGTGCGTCCA ATTATCCTGC TCATAAAGAA CAATCCGATC TGGATATTGG ATTGCCAGAT
AAGACAGGCG ATAAGGCCTA TTTAAATCTG CTGGAAGAAA ATCTCAGCAG ATTGATTGAT
ACCCTGCAAC CCGATCACAT CTTTTTTCAA TCGGGTGTGG ATGTACTGGA AACAGACAAG
CTGGGGAAGC TTTCGTTAAG CAGGGAGGGC TGCAAAAACC GCGACCGGAT GGTACTGGAT
CGATGTAAAA AATATAAGAT TCCAGTAACC ATCTCATTGG GTGGTGGTTA TTCAGAAAAG
ATTATCGATA TCGTTGAAGC ACATTGCAAT ACCTTCCGTT TGGCCCAGGA ACTTTATTTT
TAA
|
|---|
| Protein sequence | MLQIAYHPVY NHPVPEGHRF PMLKYDLIAE QLVYEGTITE SNLTTPVRIA SEDLLRSQDA
TYVHKLNTLS LSPSEIRKTG FELTAELVYR EEVIMQGTID SALHALKHGI GMNIAGGTHH
AYKEHGEGFC LYNDIILAAD YLLANKLAHQ VLVVDLDVHQ GNGTAKMAEG NTQIFTFSMH
GASNYPAHKE QSDLDIGLPD KTGDKAYLNL LEENLSRLID TLQPDHIFFQ SGVDVLETDK
LGKLSLSREG CKNRDRMVLD RCKKYKIPVT ISLGGGYSEK IIDIVEAHCN TFRLAQELYF
|
|---|
| |