| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0317 |
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| Symbol | atoS |
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| ID | 4185500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 382387 |
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| End bp | 384600 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638070326 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_676948 |
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| Protein GI | 110636741 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.824856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA TAAAATCTAA ACTACTCCTG GTTTATTTAT TATTTACATG CATTACACTA
TCTGCCTCGT TCTATTGTTA TACAATTTAC CGTGCACGTG AATATAATGC GGAAATCAAA
GATCTCATCC ATGTAATCTC TTCCGAAATA TTGATGCTGA ATAAACTCGA GATGCAGTTT
GTTGCGTACG ATTCAAAGAA CAATGTATTC TTTGAAGGCG CCGGCAGCAG TTATGTTGAA
AAGCACCAAA AGATTGTTGC AGATATTCAT GCTAAAATAA AAACATTGGA AAATGAACAC
ATTGCAAATG ATAAGATTAC TCAACGCTTA CGGCAGTTAA AGATTCAGTT GATCCATTAT
AATAACGACT ACCAGCGGTT TGTCGCAAAG GTTAAAGAGC GGGGCTTTCG TGATTTGGGT
ATTGAAGGAG AGATGCGTGA GTGTATTCAC AAAATCGAAA ACTCCTATAA AAATGCAGGC
GATGAATCGT TGCTGTTAAC AATACGGCGA AATGAAAAGG ATTATTTTTT GCGTAAAGAT
ACTACCTATA TCGACAGGCA TCATAAAAAT GTAATGCTGT TTCGGGATCA GATAAAACAA
GATAAACAAT TGACTATAGC TGAAAAAAAA TTGTATGTCA ATTGGCTGGA CAATTATTTC
GTACTCTTTA CAAAGTGGCG GGTAATTGAT AATGAAATTG GCATTGATCA GGGTATTGGC
ATGACGGCAA AAATGAAAAT GCACAATAAC CAGTTTGAAG AAATGATTCA GTCTATTAAC
GAAGAGTCTG ACCGGAGCGG TGCCGTATTA AGTACAAATA ATAAAGCAAT ATTGTTAACG
GCCATTTGTG TCTCCGTTAT ATTAAGCATT TTACTGAGTA TTTTATTTTC ACATATTTTC
ACCCGGCCAA TAAAAGAAAT GTCTGAATAT ATAGATCTAA TCGTTAAGAA TAATTTTTCA
GTTCCTACAA AAAATCTTAA AACAGATTCA AACGATGAAA TCAGAGATCT GTTTGATAAT
GTAAACTGGA TGGTAAACCG GGTGGGTGTG TACATTTGTG AGATAAAGAA AAATGAAATG
ATCATAGAGG AAAGTGCACG CAAGTTTCGT TCTATGATTG AAAACAGCAA CGATGCCATT
GCACTGATGG ATAAGGAAGG TAAGATTATT TACGCCAGCT CTTCTACTGT AAAAGTAATC
GGTTATACTT CTGCTGAAAT GGAAGGCAGG TATGTGTTTG AAGAGATTCA TCCGGAAGAC
AAAAGCAACT TGCTTGAACA CCTGAAAGAA GTAATGCTGT ATCCGGAAAC CAATGTGTAT
GTTGAAATCA GGAAGAAGCA CAAAGACGGT GGGTATCGCT GGCTGGAATG TCACTCATGC
AACATGCTTC AGGATCCGTC TGTAGAAGCC ATCATTACTA ATTACAGAGA TATTACAAGC
AGAAAAGTAA GTGAATTTAA AATTGATCAT CAATACAAAG AACTTCAAAA AGTAAATGCA
GAACTGGATG GTTTTGTATA CAGTGCTTCA CATGATTTAA AAGCTCCGTT ATTGTCTATT
CTTGGAATTA CAACTATTGC CAAACATGAT TCCAATGAAG ATATTTCTAT TTTTTATTTT
AACATGATCG AAACAAACAT TGCCAAGCTG CTTCACGTGA TAAAAGACAT TATTAATTTT
TCATGCAATA CACACCTTGA AGTTGAAAGA GAACTGGTCG ATTTTAATCA GATCATACAG
GAATCGATTC AATCGTTAAG TTATCTGGAA AATAAAGGCA AAGTAGATTT TAATATTTGT
ATTGAAGAGG GCGTAGCTTT TTATTCCGAT AAGGCACGGC TGGGAATGAT CTTCAGTAAT
ATGATTTCAA ATGCGATCAG CTACCACAAC TACGATCAGG CCAGACCGGT TATTAGTATT
TCAGTGGGAG AAATACCTGC AGGTCAAATT GAAATTATTG TTTCAGATAA CGGTCAGGGA
ATAAGCCCCG AATATCATTC CCGGATATTT GATATGTTTT ACCGGGCTTC TACAGACTCG
AAAGGATCGG GCCTGGGCTT GTATATTGTA AAAAATATTG TAGAAAAAAT GCAAGGAACA
ATTGAACTGA CATCTATTCC GGGAATCGGC ACACAATTCA AAATGGTATT TGATGCATTT
TTACCTATTA AAATAACTGA AGTCCGATCA TCATTAATGA AAATGCATGC ATAA
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| Protein sequence | MKTIKSKLLL VYLLFTCITL SASFYCYTIY RAREYNAEIK DLIHVISSEI LMLNKLEMQF
VAYDSKNNVF FEGAGSSYVE KHQKIVADIH AKIKTLENEH IANDKITQRL RQLKIQLIHY
NNDYQRFVAK VKERGFRDLG IEGEMRECIH KIENSYKNAG DESLLLTIRR NEKDYFLRKD
TTYIDRHHKN VMLFRDQIKQ DKQLTIAEKK LYVNWLDNYF VLFTKWRVID NEIGIDQGIG
MTAKMKMHNN QFEEMIQSIN EESDRSGAVL STNNKAILLT AICVSVILSI LLSILFSHIF
TRPIKEMSEY IDLIVKNNFS VPTKNLKTDS NDEIRDLFDN VNWMVNRVGV YICEIKKNEM
IIEESARKFR SMIENSNDAI ALMDKEGKII YASSSTVKVI GYTSAEMEGR YVFEEIHPED
KSNLLEHLKE VMLYPETNVY VEIRKKHKDG GYRWLECHSC NMLQDPSVEA IITNYRDITS
RKVSEFKIDH QYKELQKVNA ELDGFVYSAS HDLKAPLLSI LGITTIAKHD SNEDISIFYF
NMIETNIAKL LHVIKDIINF SCNTHLEVER ELVDFNQIIQ ESIQSLSYLE NKGKVDFNIC
IEEGVAFYSD KARLGMIFSN MISNAISYHN YDQARPVISI SVGEIPAGQI EIIVSDNGQG
ISPEYHSRIF DMFYRASTDS KGSGLGLYIV KNIVEKMQGT IELTSIPGIG TQFKMVFDAF
LPIKITEVRS SLMKMHA
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