Gene CHU_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0300 
SymbolmanC 
ID4186866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp359136 
End bp360212 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content38% 
IMG OID638070309 
Productmannose-1-phosphate guanylyltransferase (GDP) 
Protein accessionYP_676931 
Protein GI110636724 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATAA ATAATTATGC CGTAATAATG GCAGGGGGGA TAGGAAGCAG GTTCTGGCCG 
TTTAGCCGGA CAAAATATCC GAAACAGTTT CACGATGTAC TTGGTACCGG TGCTACCCTT
ATTCAGCAGA CGGTAAACAG ATTTAAAAAT ATTTGTCCGC CGGAAAATAT CATTATTGTT
ACAAATAAGG ATTATGTTGG CTTAGTAAAA GAGCAATTAC CCTTTTTACA GGATCACCAG
ATTCTTGCTG AACCTATTGG CAGAAACACA GCCCCATGTC TGGCATATGC TTCTTATAAA
ATATTGCAGC GTGATAAAAA TGCAAATATT GTTGTTGCTC CATCTGATCA CATTATTCTG
CAGGAAAAAG AGTTTGAAAA TGTAATAGTT GAAGCACTTC AGGCTACAGA GCAGGCTGAT
ATTCTTATAA CATTGGGAAT GAAGCCAACA CGCCCTGATA CAGGTTATGG ATATATTCAG
TATATCGATG AGAAAAAACT CCGTATTAAA AAGGTAAAAA CATTTACTGA AAAACCGGCG
CTTGAACTGG CTATTAAATT TATTGAAAGC GGTGAGTTTG TCTGGAATGC AGGGATCTTC
ATATTCAATG CACAGACAAT TGTAGACGCC ATTAAAAAAC ACTTGCCTGA AATGGACGAG
GTGTTTACGG AAGGGAGCGG ATTATACTGG ACGGATAAAG AAAATGATTT CATTAATAAG
GCATATTCCC GTTGCGGCAA TATTTCTATT GATTATGGGA TCATGGAAAA ATCAGACAAT
GTGTATGTAA TGCTGGCCGA TTTCGGTTGG TCTGATTTAG GTACATGGAA ATCATTGTTT
GAAAATATGC CTAAGAATGA TGATGGAAAT GTAATAGACG GTAATGTACT TACGTATGAT
GCTAAAGATA CTATTATAAA AACACCTAAA AATAAACTTG TAGTTGTTGA AGGCCTGGAA
GGCTATATTG TAGCGGAGTT TGACGATGTA CTGATGATCT GCCGCAAGGA GAATGAGCAA
CGTGTGAAAG ATTTTGTTTC AGATGTAAAA GCAACACAGG ATAAACGGTT CGTGTAA
 
Protein sequence
MDINNYAVIM AGGIGSRFWP FSRTKYPKQF HDVLGTGATL IQQTVNRFKN ICPPENIIIV 
TNKDYVGLVK EQLPFLQDHQ ILAEPIGRNT APCLAYASYK ILQRDKNANI VVAPSDHIIL
QEKEFENVIV EALQATEQAD ILITLGMKPT RPDTGYGYIQ YIDEKKLRIK KVKTFTEKPA
LELAIKFIES GEFVWNAGIF IFNAQTIVDA IKKHLPEMDE VFTEGSGLYW TDKENDFINK
AYSRCGNISI DYGIMEKSDN VYVMLADFGW SDLGTWKSLF ENMPKNDDGN VIDGNVLTYD
AKDTIIKTPK NKLVVVEGLE GYIVAEFDDV LMICRKENEQ RVKDFVSDVK ATQDKRFV