Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0300 |
Symbol | manC |
ID | 4186866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 359136 |
End bp | 360212 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070309 |
Product | mannose-1-phosphate guanylyltransferase (GDP) |
Protein accession | YP_676931 |
Protein GI | 110636724 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0836] Mannose-1-phosphate guanylyltransferase |
TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATAA ATAATTATGC CGTAATAATG GCAGGGGGGA TAGGAAGCAG GTTCTGGCCG TTTAGCCGGA CAAAATATCC GAAACAGTTT CACGATGTAC TTGGTACCGG TGCTACCCTT ATTCAGCAGA CGGTAAACAG ATTTAAAAAT ATTTGTCCGC CGGAAAATAT CATTATTGTT ACAAATAAGG ATTATGTTGG CTTAGTAAAA GAGCAATTAC CCTTTTTACA GGATCACCAG ATTCTTGCTG AACCTATTGG CAGAAACACA GCCCCATGTC TGGCATATGC TTCTTATAAA ATATTGCAGC GTGATAAAAA TGCAAATATT GTTGTTGCTC CATCTGATCA CATTATTCTG CAGGAAAAAG AGTTTGAAAA TGTAATAGTT GAAGCACTTC AGGCTACAGA GCAGGCTGAT ATTCTTATAA CATTGGGAAT GAAGCCAACA CGCCCTGATA CAGGTTATGG ATATATTCAG TATATCGATG AGAAAAAACT CCGTATTAAA AAGGTAAAAA CATTTACTGA AAAACCGGCG CTTGAACTGG CTATTAAATT TATTGAAAGC GGTGAGTTTG TCTGGAATGC AGGGATCTTC ATATTCAATG CACAGACAAT TGTAGACGCC ATTAAAAAAC ACTTGCCTGA AATGGACGAG GTGTTTACGG AAGGGAGCGG ATTATACTGG ACGGATAAAG AAAATGATTT CATTAATAAG GCATATTCCC GTTGCGGCAA TATTTCTATT GATTATGGGA TCATGGAAAA ATCAGACAAT GTGTATGTAA TGCTGGCCGA TTTCGGTTGG TCTGATTTAG GTACATGGAA ATCATTGTTT GAAAATATGC CTAAGAATGA TGATGGAAAT GTAATAGACG GTAATGTACT TACGTATGAT GCTAAAGATA CTATTATAAA AACACCTAAA AATAAACTTG TAGTTGTTGA AGGCCTGGAA GGCTATATTG TAGCGGAGTT TGACGATGTA CTGATGATCT GCCGCAAGGA GAATGAGCAA CGTGTGAAAG ATTTTGTTTC AGATGTAAAA GCAACACAGG ATAAACGGTT CGTGTAA
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Protein sequence | MDINNYAVIM AGGIGSRFWP FSRTKYPKQF HDVLGTGATL IQQTVNRFKN ICPPENIIIV TNKDYVGLVK EQLPFLQDHQ ILAEPIGRNT APCLAYASYK ILQRDKNANI VVAPSDHIIL QEKEFENVIV EALQATEQAD ILITLGMKPT RPDTGYGYIQ YIDEKKLRIK KVKTFTEKPA LELAIKFIES GEFVWNAGIF IFNAQTIVDA IKKHLPEMDE VFTEGSGLYW TDKENDFINK AYSRCGNISI DYGIMEKSDN VYVMLADFGW SDLGTWKSLF ENMPKNDDGN VIDGNVLTYD AKDTIIKTPK NKLVVVEGLE GYIVAEFDDV LMICRKENEQ RVKDFVSDVK ATQDKRFV
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