Gene CHU_0204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0204 
Symbol 
ID4185309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand+ 
Start bp250466 
End bp251128 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content38% 
IMG OID638070213 
Producthypothetical protein 
Protein accessionYP_676836 
Protein GI110636629 
COG category[S] Function unknown 
COG ID[COG5587] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02453] conserved hypothetical protein TIGR02453 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.519496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.661186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTAG TCTCCACACT TAGTTTTTTA AAAAAATTAA ATAAGAACAA CAACAAAGAA 
TGGTTCGACA AGAACCGTTC TGCATATGAA GAAGCGAAAA AAGAAGTAAA AGCATTGGTG 
CAGCTGGTCA TTGAAAAGAC GGCTGTATTT GACCCTTCAA TTGCTTCGCT TGAGCCCAAA 
GACTGTATGT TCCGGATCAA TCGGGATGTA CGTTTTTCAA AAGATAAATC TCCTTATAAA 
ACCAATATGG GTTTTATGAT TGCACCGGGC GGAAAAAAAT CAATTAAAGG TTGTTACTAT 
GTACACATAG AGCCAGGAAA TTGCTTTATA GCCGGAGGGA TCTGGATGCC GATGCCCGAA 
CATTTAAAAT TGATCCGTCA GGAAATCGAT TACAATGGAG ATGCGTTGAA GAAAATATTT 
TCTTCCAAAG ATGTTAAAAA ATATTTTTCA GATTTTGACG AGGAGTCGAA ACTGATACGC 
ATGCCTAAAG ATTACGAAGA GACCCACCCA TATGCCGAGT GGTTAAAATT AAAAAGCTTT 
ACGGTTACCT TTCCGATTGA TGAAGCAATC TTTTCAGATA AAAAAGTAGT GGAAGAAATT 
ACCAAACCCT TTAAAGGTAT TCATGCGCTG AACGCGTTTT TAAACGGTGC GCTGGATTCA 
TGA
 
Protein sequence
MTLVSTLSFL KKLNKNNNKE WFDKNRSAYE EAKKEVKALV QLVIEKTAVF DPSIASLEPK 
DCMFRINRDV RFSKDKSPYK TNMGFMIAPG GKKSIKGCYY VHIEPGNCFI AGGIWMPMPE 
HLKLIRQEID YNGDALKKIF SSKDVKKYFS DFDEESKLIR MPKDYEETHP YAEWLKLKSF 
TVTFPIDEAI FSDKKVVEEI TKPFKGIHAL NAFLNGALDS