| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1499 |
|---|
| Symbol | |
|---|
| ID | 5409380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 1436452 |
|---|
| End bp | 1437924 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 640871170 |
|---|
| Product | transporter, Ni2+-Co2+ transporter |
|---|
| Protein accession | YP_001407034 |
|---|
| Protein GI | 154148592 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.844578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATAATTT TGCTGATATT TTTAAAAACG GAAATATTAG CCTGCGCTTT ATGTGCTTTG
ATGACGCCTA CTGCACATAT TCTTTTAAAT TTTAATGTTT CACAGGATAC TCTCGAAGAT
ATTGAAGTTT CTTGGATATT TTCAAAAAAT TTCACCGATT TGACATTGGA AAGTTATGAT
TTTAATTCCA ATTCAAAACT TGATAAAAAT GAACTTGACG ATGTAAATTT CGCTATGCTG
AACTACATAT CAAATAAAAA TTTTCTAATG AATTTCGAAT GGTATGATAA AAACGGAACT
GCAAATACAA TTAAAGGAAA TTTCAGTGAT GTAAAGATGG TTATGGAAAA TGGAAAAATT
GTTTTTAAAT TTCGGCAAAA AGTGGGCATT AAAATTCAAA ACAATCGAGT TTTAAAAACA
ACGGCTGGTG ATAAAAACGG ATTTTTTAAT TTTACCTTTT TAAATTCTGG CCATAAAAAA
ATAGATGATA ATTTTTATAT TGAGTTTAAT TCAAATTTAA ATGCTAATTT TGCGCTTTTC
ATAACCGATC AAATAGAACA CAAAACGCAA AAAAGTTTGG ATGAGCCTGT AAAACAAAAC
GGTAGCGAAA ATACAAAAAA GCCAAATTTC ATCAATCAAA GCGCTATAAA CTCACTTGAA
AAATTAAAAG CCATTTTTAT AAAAAGTGCT GAGAATTTAG ATATAAAGAT TTTGATAAGC
GTGATATCCA TATCTTTTTT GTATGGATTT TTTCACGCGG CAGGTCCTGG ACATGCCAAA
ATTTTAACTA CAAGCTACTT TTTAGCAAAT GGCGGAAATT ATATGAAAAG TTTTTTATTT
TCTTTGAAAA TAGGTTTTTT TCACGTTGCC GGAGCCTTTT TCGTCGTTGT GACAACTCTG
TTTTTCGTAG ATTTAATCTC AGGAAGCATC TCGCCAAACG CCATTAAAAT AACAACTCAA
ATTTCAGCCG TTATGATAAT TTTAATTGCA ATCTTCATGT TTTTTAAAAA AATAAAAGAA
CGGGCAAATA CTCATACAAA AGAGTGCAAA TGTGCAATTT GTTCCACTAT AAAAGAACCT
GAAAGTTTAA TTTTTAGCAA TTCAAAATTT AAAATTTCAA ACAATATAAA TCACAATGAT
TTAAAATTTA AAAACATAAA ATTCAACTCT AAAAACAAAG AAGAGTGGTT TATAGCTTTA
GCCTCAGCCA TAATTCCATG CCCTGGAACA ATTTTAGCTT TTTTACTTGC TTTTAATGTC
GGAAGTTATT TGACAGCTTT TATAAGTGCA CTATTTATGG GATTAGGAAT GAGTTTTGTA
ATATTTTTGG CCGCTATTTT TGGAGCCGGT GTAAATAAAA TAACGAATTT GAAATTTAAA
AAACTGACAA TTTATATAGA ATTTTTAGGA CTTGCATTTA TGTTGATAAT TGGAATTTTG
ATGTTTTTGA TAGCGGATAA TTTAAAAATT TAA
|
|---|
| Protein sequence | MIILLIFLKT EILACALCAL MTPTAHILLN FNVSQDTLED IEVSWIFSKN FTDLTLESYD
FNSNSKLDKN ELDDVNFAML NYISNKNFLM NFEWYDKNGT ANTIKGNFSD VKMVMENGKI
VFKFRQKVGI KIQNNRVLKT TAGDKNGFFN FTFLNSGHKK IDDNFYIEFN SNLNANFALF
ITDQIEHKTQ KSLDEPVKQN GSENTKKPNF INQSAINSLE KLKAIFIKSA ENLDIKILIS
VISISFLYGF FHAAGPGHAK ILTTSYFLAN GGNYMKSFLF SLKIGFFHVA GAFFVVVTTL
FFVDLISGSI SPNAIKITTQ ISAVMIILIA IFMFFKKIKE RANTHTKECK CAICSTIKEP
ESLIFSNSKF KISNNINHND LKFKNIKFNS KNKEEWFIAL ASAIIPCPGT ILAFLLAFNV
GSYLTAFISA LFMGLGMSFV IFLAAIFGAG VNKITNLKFK KLTIYIEFLG LAFMLIIGIL
MFLIADNLKI
|
|---|
| |