Gene CHAB381_1438 details

Gene Information

• Locus tag: CHAB381_1438
• ID: 5408002
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 1371623
• End bp: 1373656
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640871112
• Product: type I secretion target GGXGXDXXX repeat-containing protein
• Protein accession: YP_001406979
• Protein GI: 154148846

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.191778
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTTAGAAA AAGTTATGAG TGCAGTAGGA CTTACCAAAG CAAACGCACA ATGGGCTTAT 
GAGCATATTT ATAACATATC TTATCAAGAT GAGGGTGCGT TAAATGGAGA TATTCTGTCA 
AATTTACTTA CAGAATTAAG TAGTAATCAT TTAGGGCATT TTATACCTAT TTTGGGCAAA 
AATGTTGGTT TTGGAGAAGG GCATTATATG GAAACTCTCA ACAAAGCTAT TTCCCAATAC 
AACAACATAG TCAAAAAATT CGACAACTCT TGCAGATATG AAGATATAAC AAATATGTAT 
CTTTCAACAG CTATTATTCA CGGAAATGGC TATGAAAAAG TCAAGGAAGA ATTTACAAAA 
TTAGGCGTTT ATGGTGCAAA TGATAAAATT GCAAATAACT CTTTGCACTT AGAAGTTATA 
ACCAAAGACA CTGACGCAAC TTCCATCTTC TCAGGCTCAA ATTTAAGCAC ACCTGCTTTA 
TATGCCCTAG TGAATTTAAA TCCTTTTATA GTTTCAAATA TAAATTCAAA TGCTTACTCT 
GAAATAGAGA AATATAGAGA TGAATATAGT GAGAACTATG TAAGCGATAA AGCAAAAATG 
TTTAAGGCTC TTATGGATAC ACCAAAGGTT GCTTCATACT ATGATGACTA TGAAACAGGC 
AAGAAAATTT CATATTATAC TTCTGTTACA GACCCTGATA GCACAGATGA ATACAATCTC 
ACTGACACAG CTTACACATT TGGCACAAAC AAAAATGATA TAGTAACTGC TTCGGTAGGA 
AAAGCCAATA GAATTTACAC CCTAGCAGGA GATGACACCA TAACTCTAAC TAGTGGCTCA 
AACTATATAG AAGCAGGAAG CGGAAGTGAT TATATAGATT TAAGCGGTAT AAAAGATACA 
AACTCAACAA ATACAATCTA TGCAGATTTA AAAGATAGCA AAGATGACAA AGATAGTGGC 
AATGATACAA TCATAGGCTC AGCCGGTAAA GATACTATGT ATGGTGGCTC AGGCTATAAT 
ACCTACAAAG CAGGAGACGG CGATACCATA GAAGATGATG ATAAAGGTCA AGGCTCTGTA 
TATTTCAATT CAAATTCTCC ACTTACAGGC GGAACATACG ATAAAGATAA AGGTTGTTAT 
GTTGGTGGAA TTTACGAATA TCATCTAAAC GGAAACACTC TTATAGTAAC AGACACAGCC 
AAAAATGAAA GCATAACCAT CAACAACTAC TCCAAAAAAG ATAAATCTCT TGGTATAGAT 
CTAATAGAAG CAGATGAGAT AGATATAATC ATATCAAATG CAACAGTAAC AGAAGGAGAC 
GAAAGCGAAC CAAATAAAGA CGGAAAAGCA CCATATAACA CTAGTATAGG TATAAAACTA 
AGTAGAGAAT TAAAAGAAGA CGAATTTATC ATCATACAAA AATACAATTA TGAAAAACAA 
TCCACAGAGT TAGTTTTATT TGGAACATTA CCACAAGATT ATGATACCAG TCTTTTTAAA 
AGCTTATTAA GTGATAATAA AACACTCGAT TTTAGCTGGT ATGGAAATAA AACAAAAGAA 
GAAGATAGAA AATACTGCGT AGGTGGCGTA AATATCTTTG CTAAATCAGA TAATTTAACT 
ATAAGAGATA TAAAACCGGG ATATGTCACT ATCAAAGACG ACGACAAAGA TCCAAACGAT 
GATAAGCCAG AAACTTACGA TCCACTTGCA ATAGACCTTA ATAATGATGG CATAAAAGGC 
ACAAATTTAG ACTATAAGAT AAATTTTGAC CTTGATAATA ACGGCTTTAA AGAGGCTACA 
AGCTGGATAG ATAACAATGA CGCCTTTATC ACCATTGATA AAAACAACAA CGGCGCAATC 
GATAATGGTA GCGAGCTATT TGGAAACAAG AGCATCTCAA ATAACGCCTA TGCCTACACT 
AATCCAAACG CAAAAAATGG CTTTGAAGCA TTAAGCGAAT TTGATAGCAA CAATGACGGA 
ATAATAGATA TAAATGATGA GAAATTTGCA AATTTAAATT TACTGGTTGC TTGA 

 

Protein sequence

MLEKVMSAVG LTKANAQWAY EHIYNISYQD EGALNGDILS NLLTELSSNH LGHFIPILGK 
NVGFGEGHYM ETLNKAISQY NNIVKKFDNS CRYEDITNMY LSTAIIHGNG YEKVKEEFTK 
LGVYGANDKI ANNSLHLEVI TKDTDATSIF SGSNLSTPAL YALVNLNPFI VSNINSNAYS 
EIEKYRDEYS ENYVSDKAKM FKALMDTPKV ASYYDDYETG KKISYYTSVT DPDSTDEYNL 
TDTAYTFGTN KNDIVTASVG KANRIYTLAG DDTITLTSGS NYIEAGSGSD YIDLSGIKDT 
NSTNTIYADL KDSKDDKDSG NDTIIGSAGK DTMYGGSGYN TYKAGDGDTI EDDDKGQGSV 
YFNSNSPLTG GTYDKDKGCY VGGIYEYHLN GNTLIVTDTA KNESITINNY SKKDKSLGID 
LIEADEIDII ISNATVTEGD ESEPNKDGKA PYNTSIGIKL SRELKEDEFI IIQKYNYEKQ 
STELVLFGTL PQDYDTSLFK SLLSDNKTLD FSWYGNKTKE EDRKYCVGGV NIFAKSDNLT 
IRDIKPGYVT IKDDDKDPND DKPETYDPLA IDLNNDGIKG TNLDYKINFD LDNNGFKEAT 
SWIDNNDAFI TIDKNNNGAI DNGSELFGNK SISNNAYAYT NPNAKNGFEA LSEFDSNNDG 
IIDINDEKFA NLNLLVA