Gene CHAB381_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_1378 
Symbol 
ID5408517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp1314553 
End bp1316181 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content34% 
IMG OID640871055 
Productputative soluble lytic murein transglycosylase 
Protein accessionYP_001406927 
Protein GI154149536 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATTTGC TTATTCGATG TAGTGTTATT TGCGCTATTT TGTACGGTTT TGCGGTAGGC 
GAAATTTTGC CATATGAAAA GCTTAAAAAC GAGCCGAAAT CTTTGGCGAA AGATTATTAT
ATTTACAGAC TTGCCGATGA AACAAAGTAT AATAAAAGCG AACTTGCCGT GCTTAGAAAT
GATGTATATC GTTATAAAGG CAAACTTGCG AAAAAACTTG ACGCTATTTT GGGAGCTGAA
AAAATTAATA AAAAATGTGC CGGTTTCGGT ATAAAAAATA TTTTAAAAGC CGACGATGCT
TGTAAAAAAG TCATAATAAA TCCGAATTTT ATCAGCAGAC TTTCATCAAA AAATCGCGCC
GTTTTGCTCA ATGAACTTGT AAAATTTCCA AATTTAATCA ATCTTATAAA CGGCATGAAC
GCCAAAAATC CTGCAATTTA TTTTGCAGAT ACTTTAGACG TGGAAAATTA TTTCATATAT
TTTAATTCTT TAAGCCAAAA AGAGCGTGAG ATAAAATTTA ACTTTGAATT GACGCCCGAT
TTTGCAAATG CTTTGTCTCA AACATACGCT TTTAAAGGAA TGTTAGAAGA TATTGTTATA
AAAGATAAAA TGCAAATTTT AGCGCATTCT TTATTGTATA TAAATCCTGC TAATTTGGGT
GATGAAATAG CATTTTTACT TGGAATAAAC GCCGTTAAAT TTAAGTCGGA CGATAAAGCT
TTCGGATTTT TTAAAGCCGC CGCCTATAAT TCAAAAAAAA TCGGAATTTC TCAAAATGCA
AAATTTTGGA TGTATCTTAT AAATGGTGAT AAAACGGCTT TAAAAGAGCT TGCAAATAGC
GATTATTACG ATATTTATTC AATAATCGCA AAAGAAAAAC TTGGAAACAG AACATTAAGC
GTAATTATTC CGAAACCTTC TTTAAACGCG CCAAAAAATT ATGATATCAG TGATCCGTTC
GCCTGGGTAA AAACTAAAAA TAAAGCTGAC GTTGCAAATG AAGCTGAGCT TAAAAAAATG
GCGATGTTCT TTGATACGAA AGCTACAATC GGCGAATACA GCTATATAAT GAATAAACTT
AATAAAAAAG ATAATTTTTA TGCGATGCCT TTTATGGAAT TTATAGGCAC GGACGATTTG
CGCAGGCAGG CTCTTATTTT AGCACTTGCA AGGCAGGAAA GTAGATTCGT TCCATCAGCA
ATTTCAACAT CTTATGCACT TGGAATGATG CAGTTTATGC CATTTGTGGC GAATGACATA
GCCAAAAAGC AAGGCTTAGC GGAATTCGAT CAGGACAATA TGTTTAAACC TGAAGTCGCT
TATAAGTTTG CAAATATACA TTTGGATTAT TTGGAAAATT ATTTAATCAG CCCTGTTTTT
ATAGCTTACG CTTACAATGG CGGTGTCGGC TTTACAAACA GAATGCTGAA AAATGGGCTT
TTTGATAAAA AAGGCAAATA TGAACCGTAT CTTGCAATGG AACTTGTGCC TTATGCCGAA
AGCAGGGATT ATGCTAAAAA GGTATTGGCA AACTTTGTAA TCTACGCTCA AATTTTAGGT
CTTAAAGTCT CGGCGGAAGA TGAAATTTTA AAACTGAGCA GTTCTGAAAA AAGTGACAAA
GTTCGCTGA
 
Protein sequence
MNLLIRCSVI CAILYGFAVG EILPYEKLKN EPKSLAKDYY IYRLADETKY NKSELAVLRN 
DVYRYKGKLA KKLDAILGAE KINKKCAGFG IKNILKADDA CKKVIINPNF ISRLSSKNRA
VLLNELVKFP NLINLINGMN AKNPAIYFAD TLDVENYFIY FNSLSQKERE IKFNFELTPD
FANALSQTYA FKGMLEDIVI KDKMQILAHS LLYINPANLG DEIAFLLGIN AVKFKSDDKA
FGFFKAAAYN SKKIGISQNA KFWMYLINGD KTALKELANS DYYDIYSIIA KEKLGNRTLS
VIIPKPSLNA PKNYDISDPF AWVKTKNKAD VANEAELKKM AMFFDTKATI GEYSYIMNKL
NKKDNFYAMP FMEFIGTDDL RRQALILALA RQESRFVPSA ISTSYALGMM QFMPFVANDI
AKKQGLAEFD QDNMFKPEVA YKFANIHLDY LENYLISPVF IAYAYNGGVG FTNRMLKNGL
FDKKGKYEPY LAMELVPYAE SRDYAKKVLA NFVIYAQILG LKVSAEDEIL KLSSSEKSDK
VR