Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1280 |
Symbol | tyrS |
ID | 5409216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 1218061 |
End bp | 1219272 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640870959 |
Product | tyrosyl-tRNA synthetase |
Protein accession | YP_001406831 |
Protein GI | 154147934 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0162] Tyrosyl-tRNA synthetase |
TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.703778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGAAT ATGATTTAAA TTCTATTTTA AAAGAATTAA ATCGTGGAAT TTCCGAAATA ATCGGTATTG AAAGAGTTGA AGAACTCATT AAAAATTATT ATGAAAAAGG CAATAGGTTT TATGTAAAAA TCGGCATGGA TCCTACGGCC TCTGATTTGC ACTTAGGACA TAGTGTTGTG CTTAAAAAAC TTGCATTTTT GCAACAACAC GGAGCTATTG TACAGTTTCT GATCGGAGAT TTTACAGCTC AAATAGGTGA TCCTACAGGC AAAAGCGAAA CCAGAAAAAA ACTTGATAGA AATACGGTTT TAAAAAATGC AAAAACTTAT CAGGATCAAG TTTTTAAAAT TTTGGATAAA GATAGAACGA ATATACTTTT TAATTCGGAA TGGCTAAATC GTCTCGGCGC TACAGGTATG ATTGAACTTG CAAGCACTTT TAGCGTCGCA AGAATGCTTG AAAGAGATGA TTTTACAAAT CGCTTTAAAA ACGAACAGCC GATTAGTATA AGTGAGTTTT TGTATCCGCT TTTACAAGGT TATGACAGCG TTTGTATGAA AAGCGATATT GAAATCGGCG GTACTGATCA AAAATTTAAT CTACTAATGG GCAGACAATT ACAAAGAACC TATAATGTCG GTAAAGAACA GGCAGTAATG ATGATGCCGC TTTTAGTAGG GCTTGACGGC GTAAATAAAA TGAGTAAATC GCTTGGAAAT TATATCGGCA TAACTGAAAA TGCAAATGAT ATGTATGCTA AAATTTTAAG CATAAATGAT GAACTGATGT GGTCATGGTA TGAGCTTTTA AGCAGTTATT CGCTTGATGA TATAAATTTG TTTAAAAAGC TTGTACAAGA CGGCGAACTT CATCCGAAAG TCGCAAAAGA AAGTCTTGCT ATGGATATAG TTACGAAATT TTATGATGAA AATTCAGCTT TGAAAGCAAA AGAAGAATTC GATAAAGTTC ATGTAAATAA TGAAGCTCCA AGCGAGATAA AAGAATTTAC AATAAGTTCT CCTGCTTGGA TTGTAAAAGC ATTGATGTCT TGCAAATTAG CCGTATCAAG CTCTGATGCA AGAAGACTTA TAAGATCTAA TGCCGTAAGT GTTGATAAAA ATAAAATTGC CGATGAGCAA CTTCAACTTA GTTCAGGCAA TTATTTTTTA CAAGTCGGAA AGAAAAAATT CGCTAAACTA ATAGTAAAAT AA
|
Protein sequence | MAEYDLNSIL KELNRGISEI IGIERVEELI KNYYEKGNRF YVKIGMDPTA SDLHLGHSVV LKKLAFLQQH GAIVQFLIGD FTAQIGDPTG KSETRKKLDR NTVLKNAKTY QDQVFKILDK DRTNILFNSE WLNRLGATGM IELASTFSVA RMLERDDFTN RFKNEQPISI SEFLYPLLQG YDSVCMKSDI EIGGTDQKFN LLMGRQLQRT YNVGKEQAVM MMPLLVGLDG VNKMSKSLGN YIGITENAND MYAKILSIND ELMWSWYELL SSYSLDDINL FKKLVQDGEL HPKVAKESLA MDIVTKFYDE NSALKAKEEF DKVHVNNEAP SEIKEFTISS PAWIVKALMS CKLAVSSSDA RRLIRSNAVS VDKNKIADEQ LQLSSGNYFL QVGKKKFAKL IVK
|
| |