| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1155 |
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| Symbol | |
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| ID | 5408660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | + |
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| Start bp | 1084665 |
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| End bp | 1089698 |
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| Gene Length | 5034 bp |
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| Protein Length | 1677 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640870838 |
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| Product | autotransporter domain-containing protein |
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| Protein accession | YP_001406711 |
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| Protein GI | 154148463 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAGGAC TAATTAAAAA TGATAAAGTC ACAAGCACTA TAGATGGAAA ACTTGAAGAT
AAAAGTAAAA CATTAACCAT AAAAGGCAAT AAAGAAACAC AAAAATCTCC GGTTTATTTA
TATTCTACAA CAATAGGTGC TAATGAAAAT ACAGAAGTAA ATTTATATGG TTTAAAGGGA
CAACATTTTC TTATAGGCGG AAAAGGTATT ATCAAAAAAG ATGATAAAGG TGATAAATTT
CTTGATTTTA TGGCTTCAGA TAAAAACGCC GTAGTAAATG TTTCATTTTT AGAAGCTAAA
CATAATCCAG CTAGTCCTTC ATGGACTGAT TATTATAAAA ATCAAAAAGC AGGTGTTTTT
AATATAGATA TATTAAATGG AACTTTAAAT CTCAATATTG GCAATAAATC CCGTAGTAAA
GATAATACAA CAGCTGAAAA AATAAATGTA ATAGGTAAAA ATTCTATATT AAATGCTAGC
AAAACTAGTG TTAGACCAGC TATGTCTTTT TTGATAGATG AAGGTGGAAA AGCAAATTTT
GCTGATACTT ATGTCTATTC GCCTGAAATT TTAGTAAAAA ACGGAAAGCT AAATGCTGAA
AATGGAGGGC TTTTACAAAC ACAAAAATTT AATGTAGGCA AAGACGGAGA GGTTAATATA
AACAATGTCC GAATAAAAGG TACAAATACA GGAGTAAATA ATACCATAAC TATAGATGGC
GGAAAACTAA ATGTAACAGA CCCTAAAATA CAAGCTAAAA ATTTTATAAT AACAAACAAT
GGTATTGTAA ACTTAACTAG TGAAAAACCT GCTGATGAAA AACTCTTAAA TGAGGACAAA
GCAAAAGATG AAGCAGTATT TATAGAATAT GGAGGTGGTA TAAATGTAGA TAGCGGTAAA
TTTATAGCAA AAAACCTACC TTTATACAAC AAAGGCAGCA TAATAATAAA AAATGGAGAA
TTTGATATAA AAGATTCAAA AATATCAACA TCTCAATATT TCTATGTAAA AGAAGGCGGA
AAAGCTACCC TAGATAATAC AAAATATACA GGACAAGAAG GAATTAATGT AGAAAAAGGT
GGTGAATTTA AAGCAAAGAA TAAATCAAAT ATAAATTTTA CAAATCAGTC TAGCCATATA
AATGGAAAGG CAATATTTGA TGATTCTACT ATTAATTCAG ATACTATTTT TATAAAAGAT
GGTGGAGAGT TTATAGTTAA AGATTCAACT GCTAAGATAA AGCAAGTAAC CGCCCAAAAA
GGAGGTAAAG CTGAGTTTTT AAACAGCACC ATAGAAAAAC ACAAAAAAGG GAATTATTTT
TGGAGTGCCG ATGGTGGGGA TATTAGTTTT ATAAATTCAA ATATAAACAA CATCAGTAGC
CTAGGTGCAG AAAATGACGG AGCTATAAAT TTAGTTAATG CAAAAATAAA TGATATTAGC
GGAATCTTCG TACATGACGG AAAATTTAAT GCTATAGATT CTGTTATAAA TTTAAAAAAT
CACTTTGTAA TAAGAGATGA CAAAGGAAAA GCCATTCTTG ATAATTCCAG CTTAAAAGCT
AGTTCCTTAG GCGGACATAT AGATTTAAAA AATAAAGTTA CTCTCGATAT AGAAAAAGAT
AAATACACAT ATAGGCGTAA GGGGGCAGAT CATTCTATAG ACATTTATGC AAATGTAGAA
AATGCAACCG ATATCATTAA AAAAGGTAAA AGTAATCTTA CATTTAAAGA CTACAAGGAT
AATTTTAAAG GAAATTTAAA TGTAGAAGAT GGTAGTTTGA CTTTAGATGG TGATTTTACA
TTAGCAAAGG ATAAAACTTT ATCAATGAAA TATCAAGGTC AAAATGGTGG TATTTTAAAA
GCTAATAAAA TGGACTTAAA AAATGGAAAT CTTTTTGTGA ATTTACAAAA AGATGCAAGT
GGCGTTGAAA CCACAATAGC AAAAACCAAA GATGGTTTAT CTTTTGACAA AAGCAAGGCG
AAATTAGAGG ATAATAGCCT AAATAGTGCT TACTCCCTAA TTCAAAAAGA CAATGAACTT
ATCCTAACAA AAAAAGCTCT TGATGGTAGG CTAATATTAA GCAAGCTTGA CCATGTCATA
AAAAAGGATT CAAAAGTATA TGTTGATAGT AGTGAACCTG ATTATATAGA TGATGCACAT
AATAATAGTC AAAATGGCAA AAACGAAAAA GGTCAAATAG TTAAGGTAAA AACAGAAGGT
GCAAAACTTG TAATAGCAGA TGTAAATGTA AAATCAAAAG GTGAAGGTGA AAATAAAGAT
AATGAATCTT TTGATATAAC AAAAGATTCA TATCTTCTTA TAAATAATTC TAAAAGTGAA
GTTGATGGGC TTAATATCTT AGAAAACTCC ACTTTAAAAC TTCAAGAAAA AAGCGATATC
ACAGCTACAA ATTTATATGT AGATAAAACC TCAAAAATGA GTATGGAAAA AAGAGACTCC
GCAGGCAGAG ATGACAAAGT TAATATGAGA GTAATAAACG CAAAGCTAGA TGGTATAGCA
AATATAGGCA AAGATTCAAC TTTTATAGCC GATAATTTAA ATCTCGGTCA AAATTCCAAA
ATAGATAGTA AAGGCACACT TGAAACTAAA AACTTAAATT TGACTGGTTC AAACATCGAA
GCTTTAAATT TAAAAATAGA TAAAAAAGCA ACTATGAACG GTGGCAATCT TAATATAGAA
AATGCAGAAT TTAATGGAGA GATAACAATA GATAAAAATA CAAATTTAAA AGCTAATATT
TTTAAAGCTA AAAATGGAAA CCTTAACATT AATGATGCAA ATATTGACTT AAAAGACGCA
ACTATAAATA GCAAAGTAGA TGTTAAAAAT TCAGCCATGA AAATAGAAAA TGCAGAATTT
AATGGAGAGA TAACAATAGA TAAAAATACA AATTTAAAAG CTAATATTTT TAAAGCTAAA
AATGGAAACC TCAACATTAA TGATGCAAAT ATTGACTTAA AAGACGCAAC TATAAATAGC
AAAGTAGATG TTAAAAATTC AGCTATGAAA ACTGAAAAAT TAAGTCTTGC AGGAAATAGC
ACATTTGATA ATGTAAAATA CACAACTAAA CATTTTGAGT TTAAAGGTGA CAGCAGCCTT
CTTATAAAAA ACTCGGTGTT TAATACAACA GGAGATAGTT CTTTTATAGT ATCAGGCGAT
ACAAATATAG ATAACTCACA AACTAGCCAC ATTAATATGA CATTAGGCAA AGATAAAAAA
ACAACAGCCG CTATAGATAA CAAAACAACT TTAACTGTTA AAAATACTCT AACTTTTGGA
CCTAATGATG CAACTTTAAA CTTAAACAAT GATGCCGTTT TAAAAGTATC AAAAATAGCA
AAAGATACAA GTGGGTCTCA CAATATAAAT GTAACAAATT CCACAGTTGA ACTTCTTGAT
GGTGGAAAAT TGTTTAGTGG CTTTAAGGAC AATGATTTAA ATTTTAAAAT TAAAAATGCT
ATTTTTAAAA CAGATGGTGA AAAAACAATA AACCACTCTA TAAGTGGTGA AAATTTCACA
AAAATTGGTA AAGGCACTAT AAAAATTCCT TTTAAAAACT GGAGAAATAC AAAAGTAAAA
GAAGGAGTGT TAAACTTCAC TGATGGTGTA GTTTTTAAAA ATGAAAAATT GGCTATTTCA
AATGGTGCAA TAGTTAAAGG CGATAAAGAC GTAACTCTTG ACAAATCATC AACACTGGAA
ATAGGAGCAA AAGGCGATGG TATAGAAAAT ATCCAAACTG GAAAATTAAT CGCCAATACA
TTAAAAATAG ATGGTGCAAC TCTTAGTGTA AAAGATGAAG CAGTAAAAAA TTTAAAAAAT
GGCGATATTA TAAAACAAAA TAAATTTTTA GAATATCAAA AATTAATTGG TTGGTTTAAT
CCTACTATTT TAGAAGATCT TACTTTTTAT GATTTGAGCT TTACTAAAGA GAAAGATATT
TTAATAGGCG TGGTTCCAAG AGCAAAAGAC ATGCTTTTAA ATGCAGGAAT GCATAGACTT
TGGGGGCTTG GTGATATTAT TGATGCTGGA TTGATAGATA ATACACTTGG TGATATTATG
CTTAAAGATA ATATTACTGC AAATGACTTA AAAACTATTC AACCGCTTAT ATCAGGTGCT
GGCATACAAG TAATTTCTGA TGCAGGAAAA ATTTCAAGAG ATGCAATTTT ATCTAGCAGT
ACATATAAAA GTGATAAAAA TTTCTGGGCT AAAACAATAG GAAGTTTTAG TCACAAAAGC
TCAACTAATG ATGGAATTTT AGGATATGAT GCGGATCACT ATGGAACCAT TATAGGTTTT
GATGGTGAAA TAGCAGATAA TGCTCGATTA GGTTTTGCTG TTTCTTATAC AAAAAGCGAT
ATTGATGGTG ATATAAATCA AAATATAAAA AGTGATACAT ATCAAGCTTT AATTTATAGT
GATATTTATG CAATAAATGA TTTAAGAATT AATCTTTTAG CAGGTGTTGG TTTTTCAGAA
AATGAAGGCG ATAAAACAGT CTCTATTATA GATAAAACCA TAAAATCAAA ATACGATAGC
AAATTCTATC AAGCTGGGTT TGGAATCTAT AAAGATGTAA GTTTAAGCAA TTCTTTTTCT
TTAACACCAT ACTTCAGAGC TGACTATATA CATGTAAAAA ATGATGCATA CACAGAAAAT
GGTGACGAAT TCTTAGCTTT AAGCGTAGAC AAACAAGACT TTGATAGTTT AGAACTTCAA
GCTGGACTTG AGTCAAAATA CCTTATAAAT GATAAGTTTT CTTTATTTGG AAAAGCTGGA
CTAATCGTAG AAACTATGGA TGATGAAACA AAAATAGACT TCTCACTCAT ATCAAATCCT
AGTAAAAAAG CTCAAATCAA ATCTGATGCA AAAAATGATT TGCTCGGCGT AGTTGGAGGT
GGTTTTGATT ATATGCCTAC AGATTCTTTA AAGTTAGAAT TTAAATATAA TGGAAAATTT
GGCGATGACT ACAACAATCA AATTATTGGA CTAGGTCTTA ACTATAGATT TTAA
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| Protein sequence | MQGLIKNDKV TSTIDGKLED KSKTLTIKGN KETQKSPVYL YSTTIGANEN TEVNLYGLKG
QHFLIGGKGI IKKDDKGDKF LDFMASDKNA VVNVSFLEAK HNPASPSWTD YYKNQKAGVF
NIDILNGTLN LNIGNKSRSK DNTTAEKINV IGKNSILNAS KTSVRPAMSF LIDEGGKANF
ADTYVYSPEI LVKNGKLNAE NGGLLQTQKF NVGKDGEVNI NNVRIKGTNT GVNNTITIDG
GKLNVTDPKI QAKNFIITNN GIVNLTSEKP ADEKLLNEDK AKDEAVFIEY GGGINVDSGK
FIAKNLPLYN KGSIIIKNGE FDIKDSKIST SQYFYVKEGG KATLDNTKYT GQEGINVEKG
GEFKAKNKSN INFTNQSSHI NGKAIFDDST INSDTIFIKD GGEFIVKDST AKIKQVTAQK
GGKAEFLNST IEKHKKGNYF WSADGGDISF INSNINNISS LGAENDGAIN LVNAKINDIS
GIFVHDGKFN AIDSVINLKN HFVIRDDKGK AILDNSSLKA SSLGGHIDLK NKVTLDIEKD
KYTYRRKGAD HSIDIYANVE NATDIIKKGK SNLTFKDYKD NFKGNLNVED GSLTLDGDFT
LAKDKTLSMK YQGQNGGILK ANKMDLKNGN LFVNLQKDAS GVETTIAKTK DGLSFDKSKA
KLEDNSLNSA YSLIQKDNEL ILTKKALDGR LILSKLDHVI KKDSKVYVDS SEPDYIDDAH
NNSQNGKNEK GQIVKVKTEG AKLVIADVNV KSKGEGENKD NESFDITKDS YLLINNSKSE
VDGLNILENS TLKLQEKSDI TATNLYVDKT SKMSMEKRDS AGRDDKVNMR VINAKLDGIA
NIGKDSTFIA DNLNLGQNSK IDSKGTLETK NLNLTGSNIE ALNLKIDKKA TMNGGNLNIE
NAEFNGEITI DKNTNLKANI FKAKNGNLNI NDANIDLKDA TINSKVDVKN SAMKIENAEF
NGEITIDKNT NLKANIFKAK NGNLNINDAN IDLKDATINS KVDVKNSAMK TEKLSLAGNS
TFDNVKYTTK HFEFKGDSSL LIKNSVFNTT GDSSFIVSGD TNIDNSQTSH INMTLGKDKK
TTAAIDNKTT LTVKNTLTFG PNDATLNLNN DAVLKVSKIA KDTSGSHNIN VTNSTVELLD
GGKLFSGFKD NDLNFKIKNA IFKTDGEKTI NHSISGENFT KIGKGTIKIP FKNWRNTKVK
EGVLNFTDGV VFKNEKLAIS NGAIVKGDKD VTLDKSSTLE IGAKGDGIEN IQTGKLIANT
LKIDGATLSV KDEAVKNLKN GDIIKQNKFL EYQKLIGWFN PTILEDLTFY DLSFTKEKDI
LIGVVPRAKD MLLNAGMHRL WGLGDIIDAG LIDNTLGDIM LKDNITANDL KTIQPLISGA
GIQVISDAGK ISRDAILSSS TYKSDKNFWA KTIGSFSHKS STNDGILGYD ADHYGTIIGF
DGEIADNARL GFAVSYTKSD IDGDINQNIK SDTYQALIYS DIYAINDLRI NLLAGVGFSE
NEGDKTVSII DKTIKSKYDS KFYQAGFGIY KDVSLSNSFS LTPYFRADYI HVKNDAYTEN
GDEFLALSVD KQDFDSLELQ AGLESKYLIN DKFSLFGKAG LIVETMDDET KIDFSLISNP
SKKAQIKSDA KNDLLGVVGG GFDYMPTDSL KLEFKYNGKF GDDYNNQIIG LGLNYRF
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