Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0766 |
Symbol | selB |
ID | 5408688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 706599 |
End bp | 708416 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640870462 |
Product | selenocysteine-specific translation elongation factor |
Protein accession | YP_001406340 |
Protein GI | 154148887 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00475] selenocysteine-specific elongation factor SelB [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGTC TGATAATCGG TACAGCAGGT CATATTGATC ATGGAAAAAC AGCTTTAATA AAAGCTTTAA ACGGTTTTGA AGGCGATCAA AATCCAAATG AAAAAGTTCG CAAAATTACT ATAGATCTTA GTTTTTCGCA TTTACAAAAT AAAAATAAAA ATATCGCTTT TATAGATGTT CCAGGACACG AAAATTTGGT CAAAACAATG ATTTCGGGGG CCTATGCGTT TGATGCGACG CTTTTAGTCG TAGCAAGCGA TGACGGAATT ATGCCTCAAA CAAAAGAACA TTTGCAAATT TTATCAATTC TTGGGGTTTC AAGAATTGTG CTATGTATTA CAAAATGCGA TTTAACGGAT ACAGTGCGTC AAAAATACGT CGAAAATGAA GTTAGAAATT TTGTTAAAAA TTTTAAAAAT CTTACGATTT TAAAAAGTTT TTTTATAAGT ATTAAAGATT TGTCCGGCGT TTCCGGTTTG CGCGAATTTT TATTTACCAT TGAACCTATA AAACGCGTCG ATAGCGAAAT TTTGCATTAT TATATAGATA GAGTTTTTTC TTTAAAAGGT TTCGGAACAA TTGTTACCGG AAGCCTTATA AGCGGAATTT TGCGAAAAAA TGAGAAAATA TACAACTGCG ATTTGGATAA AAGTTTTATT GTAAAAAATC TTCAAATTCA TGATGAAAAT GTCGAAATTG CAAGCTCACC AAACCGTGTA GCAATAAATT TGGATGCCAA AACCTCGGAG CTTGAAAAAG GACAGATTTT TAGTAAAAAA GGTTTTTTTC GCGGATTTAA TGAGTGTGAT TGCGTTTTTT ACGGTGAAAT TTCTCATAAA CAAAATGTCA TTTTTTGTGT CGGTTCGCGT CAAATAGCTG CAACAGCACT TATTTTAAGC GAAAATGGAA ATGAAAAATT TATAACTTTT AAGTTTGAAA AAGAAATTTT TGTAAAATTT AACGAACATT TCGTAGTTTT AGCGTCTTCT CGCGTAATAG GTGGAGGAGA TATTCTAAAT CCTGTTACCG AGCCGCTTAA AAAATCGCAA AAAATTGCTC TTTTATGTGA GCTGAAAGAT AAAAATTTCA TTAAGGTTTT TGAAATTTTA TCATCTTCTC ACAAACATGG ATTTGGTCTT ATTTCGTCAT TTCAGCGCTT TGATATGACG CATGAAAATG CTTTGAAAAT CGCACGAAAT TTAAAAAACG CCATAACGGA TGAAAGCTCG CTTTGTATTT ATGATAAAAG CGCCGCTGTA GGCGATTTAA AGGATTTTAT AAATTTTATC GTTTCAAAGA ATGATAGGGC GGTTATTTCG GCACAAAGTT TAGCTTTAAA AATTTCATGG GCAAGTCCGT TTTTGTGTGA TTTAACTTTA AACGAACTTA TAAAAGATAA AATTTTACAA AAAAACGGAA ATCTTTTTAT AAAATTCGGA GCCGATTTTG ATGAAATTAC GCAAAGTCTG GAAAATAAAA TTTTTGAAAT TTTAAGTTGC GGCGGTATCG CGCCGATTGC ACCTTACAAT ATTTACGACG AGCTTGAAAT AGATAGAACC TGTGGCGACA ATGCGATGAA GAAACTTACA AAAGCCGGTA AAATCGTGCG AATTACGCAC AATGTATTTT TAACCGATCA AAATTTGCAG AAACTAATCA AAAAAATGCG CTCAATTATT GCTTCACGTG GCTTTGTAAA TGTCAGCGTA CTGAAAGATG AACTTGGTAT CAGTCGTAAA TTTCTGATTG CATATTTGGA ATATCTGGAT CTTTTTGATG ATATAAAAAA AGACGGTAAT AATCGCATTT TTAAGTGA
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Protein sequence | MNSLIIGTAG HIDHGKTALI KALNGFEGDQ NPNEKVRKIT IDLSFSHLQN KNKNIAFIDV PGHENLVKTM ISGAYAFDAT LLVVASDDGI MPQTKEHLQI LSILGVSRIV LCITKCDLTD TVRQKYVENE VRNFVKNFKN LTILKSFFIS IKDLSGVSGL REFLFTIEPI KRVDSEILHY YIDRVFSLKG FGTIVTGSLI SGILRKNEKI YNCDLDKSFI VKNLQIHDEN VEIASSPNRV AINLDAKTSE LEKGQIFSKK GFFRGFNECD CVFYGEISHK QNVIFCVGSR QIAATALILS ENGNEKFITF KFEKEIFVKF NEHFVVLASS RVIGGGDILN PVTEPLKKSQ KIALLCELKD KNFIKVFEIL SSSHKHGFGL ISSFQRFDMT HENALKIARN LKNAITDESS LCIYDKSAAV GDLKDFINFI VSKNDRAVIS AQSLALKISW ASPFLCDLTL NELIKDKILQ KNGNLFIKFG ADFDEITQSL ENKIFEILSC GGIAPIAPYN IYDELEIDRT CGDNAMKKLT KAGKIVRITH NVFLTDQNLQ KLIKKMRSII ASRGFVNVSV LKDELGISRK FLIAYLEYLD LFDDIKKDGN NRIFK
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