Gene CHAB381_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0616 
Symbol 
ID5409551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand- 
Start bp560302 
End bp560943 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content32% 
IMG OID640870320 
Producturacil-DNA glycosylase superfamily protein 
Protein accessionYP_001406203 
Protein GI154148675 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.539351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACA ATTCACTTAT TTACAGACTT TATTATTACA AACTTTTTGG CTACGATTAC 
ATAGATGAGT GTTTTTTGCT AAACCGACCA GAGTTCAGTT TCGATAATTT GGATGAAATG 
ATGAAAGAAA TAAAAGTCTG TAATCTTTGC GAACTATGCA AATCAAAAAG TGCCGATATT 
TTGCCACAAG GAAGCGAAAG CAGTGAAATA ATGGCTATTT TTTTAAGTCC AAGCGAAGCC 
GATGAAAAAA ACGGAAAAAT TTACAGCGGA AATTTCGGAA AAAAAATTCT TGAGCTGTTT 
GACGAATGTA AATTGAGTTC TCATAAAATT TACACGACTT TTTTGATAAA ATGCCCTGCT 
CCAAATGATA TAAGTATGCG AACTATTGTA AATTGCAGTC CGTATATTTT TGATGAAATT 
AAACTGGTAA AACCGAAAAT CGTTTTGCTT TTTGGAGCAA TAGTTTCAAA AATCGTGTTA 
AGAAATGAAC AAATGCCAGA TATTTCACTA ATTCACGGCT CTATGTTTAT GGATGGAGAT 
GTAAAGTTTA TGCCGACTTT CGATATGCAT TTTATCGCGT TAAATCCAAG CAAAATAGAA 
CTTTTTAAAG CAGATCTTAA AAAAGCGGGA AAAAGTTTAT GA
 
Protein sequence
MNNNSLIYRL YYYKLFGYDY IDECFLLNRP EFSFDNLDEM MKEIKVCNLC ELCKSKSADI 
LPQGSESSEI MAIFLSPSEA DEKNGKIYSG NFGKKILELF DECKLSSHKI YTTFLIKCPA 
PNDISMRTIV NCSPYIFDEI KLVKPKIVLL FGAIVSKIVL RNEQMPDISL IHGSMFMDGD 
VKFMPTFDMH FIALNPSKIE LFKADLKKAG KSL