| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0565 |
|---|
| Symbol | |
|---|
| ID | 5409527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | - |
|---|
| Start bp | 515900 |
|---|
| End bp | 516964 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640870270 |
|---|
| Product | CmeA |
|---|
| Protein accession | YP_001406153 |
|---|
| Protein GI | 154148438 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000015665 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAA TATTGAAAAT TTCACTTTGC GCCCTAATTT TTGCGCTAAT AAGCGGTTGC
GGCGACGAAA AACAAACTGC ACAACGAGAA AAAAAAGCCG TCCCGGTTGG AATTTTTGTA
GCCAAAATGG GTGCAATTCC GATAAATTTT GAATTTCCGG CAAAGATTAT CAGCGAACAA
AACGTTGATA TCATAGCAAA AGTACCTGGA ACTCTTTTAA AACAAAATTT TAAAGCCGGA
GATTTTGTAA AAGAAGGTGA TGAACTTTTT GTGATAGACC CTGAAAAATA TCAAGCGGCT
TTCGACAGCG CAAATGCAAG ATTTAAACAA GCGGAATTTG ATTATAAACG TGCTTTAATG
CTTCATAAAA GTAATACGAT AAGTAAAAAA GAGTATGATT CGGCGATTGC AAATTACGGT
ATAGCGAAAG CGGATTTGGC AAATGCCAAA ATAGATCTTG GATACACAAA AATAATTGCA
CCTTTTGATG GTGTAACAGG CGATCCTTAC AAAGACATCG GTGCTTATAT TTCACTTAAC
GATTCAAAAC TTGTAAGACT TACAAAACTG GATCCGATTA ATGCTGATTT TGCGATTTCA
GAAGTTGATA CTTTAAGTAT AAATGAAAAA TTAAATAGTG GCGAATGGGA ACAAAAAGGC
GCGCCTATAA CACTTAAATT AAATAACAAA GATTATAATG GAACAGTTAG TTTTATAGAT
AAAGTTATAA ATGACGGCAC CGGTTCGGTT GATGCTAAAG CCGTATTTGC AAATCCTAAT
TTTGAAATTT TACCAGGAGC ATTTGCAAAA GTTGTAATGA GCGGACTATA TCAAAAAAAC
GGCTTTAAAA TTCCACAATA TGCAGTACAA CAAGATGCTA CTACAATGTT TGTATATGTA
GTTCAAGACA ATAAAGCGAC ACGTAAAAAT ATAAAAATAC AATCTCAAAA TAACGGCTGG
TCGGTAATCT ACGAAGGACT TGCCGATAAT GATAAAATTA TAATAGACAA CTTTGCTAAA
CTTGGAGTTG GCGTTCCTGT TAAGATTGTT GAAGGTAATA AATAA
|
|---|
| Protein sequence | MNKILKISLC ALIFALISGC GDEKQTAQRE KKAVPVGIFV AKMGAIPINF EFPAKIISEQ
NVDIIAKVPG TLLKQNFKAG DFVKEGDELF VIDPEKYQAA FDSANARFKQ AEFDYKRALM
LHKSNTISKK EYDSAIANYG IAKADLANAK IDLGYTKIIA PFDGVTGDPY KDIGAYISLN
DSKLVRLTKL DPINADFAIS EVDTLSINEK LNSGEWEQKG APITLKLNNK DYNGTVSFID
KVINDGTGSV DAKAVFANPN FEILPGAFAK VVMSGLYQKN GFKIPQYAVQ QDATTMFVYV
VQDNKATRKN IKIQSQNNGW SVIYEGLADN DKIIIDNFAK LGVGVPVKIV EGNK
|
|---|
| |