Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0332 |
Symbol | |
ID | 5408643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 297829 |
End bp | 300366 |
Gene Length | 2538 bp |
Protein Length | 845 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640870041 |
Product | dead/deah box helicase domain-containing protein |
Protein accession | YP_001405934 |
Protein GI | 154149514 |
COG category | [R] General function prediction only |
COG ID | [COG1204] Superfamily II helicase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.616588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTAGATT TTAAGAAAAA AATTGCTTTA AAAAGTAAGT CAAAAATTAC CAATCCTATT GATTTGTATA ATACGCTTGA TAGAAAGAGT ATTGCAGGTC CTTTGAGACC TGTTCAAGAA TATGCTTTGG ATGAGTGGTA TAACAATAGA AAAGATGAAA GAGATCTTAT TGTAAAGCTA CATACTGGAG AAGGAAAAAC TTTAATTGGT TTGTTAATGC TACAATCAGC ACTTAATTTA GGCGAGGGAC CTTGTATATA TGTTTGTCCT AATATTTATC TCGTAGAACA AGTTTGTGGG GAAGCAGAAA AATTCGGTAT TCCGTTTTGT ATTATTGATA ATCATAATCT AATTCCTAAT GAGTTTTTAT CAGCTGAAAA AATACTAATA ACTCATGCAC ATAAAATATT TAATGGGAAA TCAATTTTTG GAATTGGTAA TAACTGCATA AAAGCAGGGA CAATTGTTTT AGATGATTCC CATGCTTGTA TAGATGTATT AAAGAATTCG TTTACTATAA CGATAAGTAG GGAAAACAAT GAAGCCATTT ATAATAAGAT ACTAACGTTA TTTTCAGATG ATTTAATAGA ACAGGGAGAA GGAAGCTATT TAGATATTAA AGCAGGAGAA TACGACACTC TTATGATGGT TCCTTATTGG GCGTGGAATA GCAAAAGGAT GGAACTTTTA TCTATCCTAT CTGAATATTC TTTAATAGAC GAAATTCAAT TTGTATGGCC ATTGATAAAA GATAAAATAA TAGAGTATTC ATGTTTAATA TCTGGTAATA AAATTGAAAT AACTCCATAT AATGTTAGTG TAGAGCAATT TCGAACATTT TCATCAGCGA AACGAAGAAT ATTAATGTCT GCAACAACAC AAGAAGATAT ATTTTTTGTA AAAGGGCTTG ACTTCTCTAC TAATGCTGTT GCAAATCCAA TTAAATATCC ACAATCACGA TGGTCTGGAG AAAAAATGCT TTTAATGCCG TCGTCGATAG ATGAAGAATG TGATCGAGAT TTAGTTGCAA CCCAATTTGC TAAACTGACG AATGCACCTT TTGGTGTTGT AGCAATCGTA CCGAATACAA AAAGGGCAGT ATATTATGAA AAGATTGGGG CAATTTTCCC CAAAAATAAT AAAGAATTAT TCGAAGTTAT TGATGACTTG AGAAAGGGAA AATTTAGTAA TACTGTAGTT ATAAATAACA GGTATGATGG TATTGATTTA CCTGATGAAA GTTGTAGAGT TTTGGTAATA GATTCGTTGC CTTATTTGAA TAGCTATTTT GATAAATACG AAGAGAAATG CTGCCCAAAT AGTGAAATAA TAAATAAAAA AATTGCTCAA AAAATAGAGC AAGGTATAGG TAGAGCGGTT CGTGGTGAAA AAGATTATTG TGCAATTATC GTAATTGGTT CAGATATTGA AAAATTTATG CGAGGTGTTT TAACGAGAAA ATATTTTTCG TCTCAAACAC AAAAACAAAT TGAAATTGGT TTTGAAGTTG CTAAAATGGC AAAAGAAGAG ATTTTACAGG ATGATACTTC AATGAAACAA ATATTTTCTT TGATAACGCA AATATTAAAT AGAGATGAGG GTTGGAAAGA ATATTATGCT AGCGAAATGA ATGAAATCGA AGATGGGGTT TTAGATACTT CGATTTATGA AAGATATGCT GCAGAGACTA AATTAGAAAA ACTATTTTCT GATGGAGAAT ATGAAAAAGC ATCTGAAGAA ACGCAGAAGT TTATTGATAA GTTTATCAAT GATGATTTAG AAAAAGGCTG GTATTTAGAG CAGATGGCAA GATATGCATA TATGTACTCA GAGGAAAAAT CAAAAACACT TCAAAAGTCT GCATTTAAAA AGAATCCTCA ATTATTAAAG CCTAAAGAGG GAATTGCATA TTCAAAAATC TCTTTCCTGA ATGAAACTAG AATAAATAAA TTCAAAAGCA ATATTGGTAA ATATGACAGT TTTAATGAAT TTAATCTTTA TATAAATGAA CTGATAGAAA ATCTTTCTTT TGGCATTGCG GCTGAAAAAT TTGAATCTGC ATTAAAAAAC TTAGGTGAAA TTCTAGGCTA TGTTAGTCAA CGTCCAGATA AAGAAATTAG AAAGGGTCCA GATAATTTGT GGTGTGTTTC AAATAAAAAA TATGTATTTT TTGAGTGTAA AAATGAAGTG GACGAAAATC GAAATGCTAT AAAAAAATCT GAAGCAGGTC AATTTAATAA TCATTGTGGA TGGTTTAAGA AAGAGTATGG GGAACTTGTA GATGTTTTGC GTATAATGAT AATTCCTACT AAGCAGTTAG CACATGATGC GGATTTTAAT GAGGAAGTTT TCGTGATGAG AAGGAATGGT TTAAAAAAGC TAAAAGATAA TCTAAAAAAG TTTGTAAAAG AAATCAGAAA ATACGAATTA GATTCATTAT CTGATGAAAA AATCCAAGGG TATTTAAATA TGTACAAATT AAATATTGAG GATTTTCCAG GAAATTATAT TGAAGATATA TATCATTTAA AAAAATAA
|
Protein sequence | MVDFKKKIAL KSKSKITNPI DLYNTLDRKS IAGPLRPVQE YALDEWYNNR KDERDLIVKL HTGEGKTLIG LLMLQSALNL GEGPCIYVCP NIYLVEQVCG EAEKFGIPFC IIDNHNLIPN EFLSAEKILI THAHKIFNGK SIFGIGNNCI KAGTIVLDDS HACIDVLKNS FTITISRENN EAIYNKILTL FSDDLIEQGE GSYLDIKAGE YDTLMMVPYW AWNSKRMELL SILSEYSLID EIQFVWPLIK DKIIEYSCLI SGNKIEITPY NVSVEQFRTF SSAKRRILMS ATTQEDIFFV KGLDFSTNAV ANPIKYPQSR WSGEKMLLMP SSIDEECDRD LVATQFAKLT NAPFGVVAIV PNTKRAVYYE KIGAIFPKNN KELFEVIDDL RKGKFSNTVV INNRYDGIDL PDESCRVLVI DSLPYLNSYF DKYEEKCCPN SEIINKKIAQ KIEQGIGRAV RGEKDYCAII VIGSDIEKFM RGVLTRKYFS SQTQKQIEIG FEVAKMAKEE ILQDDTSMKQ IFSLITQILN RDEGWKEYYA SEMNEIEDGV LDTSIYERYA AETKLEKLFS DGEYEKASEE TQKFIDKFIN DDLEKGWYLE QMARYAYMYS EEKSKTLQKS AFKKNPQLLK PKEGIAYSKI SFLNETRINK FKSNIGKYDS FNEFNLYINE LIENLSFGIA AEKFESALKN LGEILGYVSQ RPDKEIRKGP DNLWCVSNKK YVFFECKNEV DENRNAIKKS EAGQFNNHCG WFKKEYGELV DVLRIMIIPT KQLAHDADFN EEVFVMRRNG LKKLKDNLKK FVKEIRKYEL DSLSDEKIQG YLNMYKLNIE DFPGNYIEDI YHLKK
|
| |