Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1730 |
Symbol | |
ID | 4538458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 1686525 |
End bp | 1688066 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 639747080 |
Product | Ni2+-Co2+ transporter (NiCoT) family protein |
Protein accession | YP_892848 |
Protein GI | 118475351 |
COG category | [R] General function prediction only |
COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAG TTTTTTTAAC TTTAATTTTA TTATTGCAAA GCGCGTTTGG ATGCGCGCTT TGCTCACTTT ATTCACCTAC GGCTCATACT GAGATAAGTT TTATCGAAGA TGATGATAAA ATAAAAGATG CAAAAGTCAA ATGGATATTT TCTGAGAATT TTACCGAATT GACTTTTAAA ACATATGATA TAAACTCAAA TTTAAAACTA GAAGAAGATG AATTATCAGA GATTCAAAAA GCTCTTTTGG ACTATTTGGA GCCTAAAGAT TATTTAATGG ATTTTTCGTA TTATGACGGA GAGGAAAAAA GCAAAAAACT AAATTTAAAA GCAAATGAGG TAAAAACCGC TATCGAGGAC GGAAGACTCG TTTTTACATT TTTATTTCCT TTAAATTTGG ATTTAAAAGA TGGTAGAGTA ATTCGAATAA GTATATTTGA TACGCAAGAG TATTTTAACT TCAAAATCGC AGATTCTAGT GCATATGAGA CAAAAAGTGG ACTTTTCATC AATCCAAATA TAAATTTAAA TATTGCATTT TACGAGATTG ATAAAGAGAA AAAAACAAAT CCCGATAAGC CTAGTTTAGC TAGTATAATA CCTAAAAATA CGAACCTCTC AAATGCGGAT GAAAGTCCAA AATACGACTC TACGCAAAAC GCTACTTTGG ATTCTTTAAA AGATATAGAT AGAATCGATG AAGAAAAATA TAATCTTTTA GCAAAAGTTA GTACAAATTA TCTTGATAAT TTAAAGATGC TTATTAAAGA TAGCAGCGGT TCTGGAGTGT TTGCTATTTT GCTAGTTTCG TTTGTTTATG GATTTTTACA TGCTGCTGGT CCGGGACATG GAAAACTTCT TACTACTAGC TATTTTGTGG CTAACCGCGC TAGTTATATG AAGGCGATCA ACTTGTCCTT AAAAATCGGC TTTTTGCATG TTATTGGAGC GTTGATTTTG GTTTATGTTA TGATGTTTGT TATAAATGCT TTTATAACAA AAGCTACAAA CGAAGCTGCT AGTATCACGA CAAAAATCTC GGCCGTCATA ATTATATTAA TAGCTATTTT TATGATTTTT ACTAAATTAA AGATATTTTT CAAATCAAAA AAAATTAAAT TTAAAACAAT TAGCGATCAA TCCAAAATAT ATACCAAAAT TTTTAACTAT TCAAATTCGA ATCATGAACA TAACGGTACT TGCGGCTGTG TTTGCGCCTC TTTTTCTTCA GGATTTCCTC GCTCGGTTTA TGAGTGGATG CTTGTTTTTG CCGCAGCTCT TGTACCTTGC CCAGGAACAG TGCTTGTTTT TGTTTTGGCA TTTAGTTTAG GTAGTTTTGG TATAGGATTG GCAAGTGCTT TTATGATAGG TCTTGGTATG GCTAGTGTGA TATTTATAGC GGCGGTATTT GGTAAAAGTA TGAATGATTC GTTATTTAAA TTTAAAAATC TTAGAGTTTA TCTTGAGTTT TTAGCTCTTG CTTTAATGAT AGTTCTTGGT GTTTATATGT TTATTATTTC AAGTAGAGTT AGTGTTTTAT GA
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Protein sequence | MKVVFLTLIL LLQSAFGCAL CSLYSPTAHT EISFIEDDDK IKDAKVKWIF SENFTELTFK TYDINSNLKL EEDELSEIQK ALLDYLEPKD YLMDFSYYDG EEKSKKLNLK ANEVKTAIED GRLVFTFLFP LNLDLKDGRV IRISIFDTQE YFNFKIADSS AYETKSGLFI NPNINLNIAF YEIDKEKKTN PDKPSLASII PKNTNLSNAD ESPKYDSTQN ATLDSLKDID RIDEEKYNLL AKVSTNYLDN LKMLIKDSSG SGVFAILLVS FVYGFLHAAG PGHGKLLTTS YFVANRASYM KAINLSLKIG FLHVIGALIL VYVMMFVINA FITKATNEAA SITTKISAVI IILIAIFMIF TKLKIFFKSK KIKFKTISDQ SKIYTKIFNY SNSNHEHNGT CGCVCASFSS GFPRSVYEWM LVFAAALVPC PGTVLVFVLA FSLGSFGIGL ASAFMIGLGM ASVIFIAAVF GKSMNDSLFK FKNLRVYLEF LALALMIVLG VYMFIISSRV SVL
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